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GT20176

CSHL Arabidopsis genetrap mutant lines

Original: GT20176

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20176

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 507532 [Map]; Strand: c
      • AT4G01200.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20176 - 5-prime edge
    CGATTTAACC GACGGCTTAA ATTCTCCGGC GGTGGAGCTT CACTGTGAAC 
    AACAAAGAAA GAGAGAAGAT GGAGGAGACG CAAGTTCTTG AGATCAATCT
    CATCTCTGCG CAAGGACTTA AAGAACCGAC GGGAAAGCTC CGGCGATTTC
    AGACTTACGC ATCCGTCTGG GTTGATTCTT CCAGCAAACT CCGGACTCGA
    ATTGATCGGA TCGGCTCTGA GAATCCGATC TGGAACGACA AATTCGTTTT
    CCAGGTATCG CCGGAGTTTC TATCTAGCGA AACTTCTGGT GTTTCAATCG
    AGATCTACGC CGTTGGTTAC TTGCGAGATC ATCTGATCGG AACTGTTCGC
    TTCCTCGTGA GTAACTTCCT CCCAACCGCC GCCGTGAAAG TTCCATCTCT
    CGTCGCGCTT CAGATCCGTC GTCCATCTGG AAAGTTTCAC GGCGTTCTTA
    ACATCGCGGC TATGGTGATG GATGCTTCTG AACTTCCAGC TGATTTCTTC
    AAGTCGGTTC AAGAGATCCG TCGGAGTCGG AAAATGAGAA AGTCTAGATC
    TGCGGTTAGT TCGTCGGAGA ACGGTTCCGC TGACGACGGT GAGAGTTCGA
    AAGAGAATTC GGTTTGCGGA TCGGTTAATT TCTCCGACGA CGGTACTGAC
    TCGACGGCAT CTTCTCCGAT GCCGTCTCCT CTCAGAGACT GGAACGCTGT
    T

AT4G01200.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 277 Blast hits to 277 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR