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GT19974

CSHL Arabidopsis genetrap mutant lines

Original: GT19974

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19974

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14546542 [Map]; Strand: c
      • AT2G34510.1 - [+] show detail - Protein of unknown function, DUF642
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT19974 - 5-prime edge 
    GGCTGTTCCT AACATAATCT CATCACTTTT CTTGGTTTTG TTTTTGGGGG 
    GTATAGCTCA TAGTGTTAAT GGGTTGACGA AAGCATGATT CTTTTTGCTT 
    CTGTGGTTAT TTGATTTCGG AAACCTGACC CATTCTCTCT GTTCTCTCTG 
    TTCCAAGAAC AGAGGATTCA CCATGGCCTG TTGTACTTAG TTCTTCTTTC 
    TCAACCAGTT TACTTTCAGA TCTGTATAAC ACAAAAAATT GGATAAGAAG 
    GAATTTGAAG TTATAATATC CACTTCGATT ACAAAGTTGG GTTCTAGGGT 
    TTATCCTCAA TCTCACTTCT TCTCTCTCGA

AT2G34510.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF642
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT1G29980.1); Has 305 Blast hits to 265 proteins in 22 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR