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Mutant Lines
GT19780

GT19780

CSHL Arabidopsis genetrap mutant lines

Original: GT19780

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19780

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 2579397 [Map]; Strand: w
- AT3G08500.1 - [+] show detail - myb domain protein 83
  Distance: -1151; Region: intergenic
- AT3G08505.1 - [+] show detail - zinc finger (CCCH-type/C3HC4-type RING finger) family protein
  Distance: 680; Region: intergenic

CTGGTCAGTC CTCTATTGGT CTCATGCTTT ATATTGTATC ATCTTCGGCC 
CAATTCAACT CATAAAACAA GAGGCTCCTG TCCTGTCTGT GACTATAAAT 
CAAAATTATT TGGGCCTATA AACTATCATT GGGCTCATGC TTCAAATTGG 
GTATTCTTTC ATCGCACGTA TGATGATTTT AAAACTTGGT CTTTTCACCA 
AATCCATTTA AAAGAAGATT CATGTTAGAT GGGTTTTGTT CTATAGGTCA 
TTAGTCATTA CAATAACAAT CGTTGACAAA CAAACAGAAA GTGGGGTTTT 
ATGAAATGAG CATTAACCTT ATGCTCTTCA CGTCCCCACG AACTTCTTCT 
TTCCCTATAA AACAACAACA TTGGTAAAGC CAAAGCCAAA GGTGACATAA 
TTGGTTTTGA GAGGGTCAAA TTTA

AT3G08500.1

Model type: Protein coding
Short Description: myb domain protein 83
Curator Summary: Encodes a putative R2R3-type MYB transcription factor (MYB83).
Computational Description: myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G08505.1

Model type: Protein coding
Short Description: zinc finger (CCCH-type/C3HC4-type RING finger) family protein
Computational Description: zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 1267 Blast hits to 1227 proteins in 242 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 258; Plants - 154; Viruses - 158; Other Eukaryotes - 103 (source: NCBI BLink).
Link: InterPro Scan - TAIR