1. Home
  2. Mutant Lines
  3. GT19629

GT19629

CSHL Arabidopsis genetrap mutant lines

Original: GT19629

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19629

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 662961 [Map]; Strand: w
      • AT4G01530.1 - [+] show detail - transposable element gene
        Distance: -447; Region: promoter
    Flanking Genome Sequence: GT19629 - 5-prime edge 
    TTTTTGGAAC CGAGGGGGGT ATTATTGTCC CAACCTATTT AAGTATTCAT 
    ATATCACCGT TCTTTTATTT AACGGCGGTT AAATTTCCCC AAACAAAACA 
    AAACCGGTTG ATATACCGTT GAAGGGGACT TTATTTGGTA GGGAATATAA 
    CAAAAATAAC TTATTTATAT AATATGATTC GACAACGTTG GGTTATTAAA 
    AACATCTATC CAAATACAAC GTAAACAAAT AAAACCCGGA AAAAAGGGGC 
    TTTCCTTTGG CTCGGGAACC CGGGGCCTTA AAAGGGGACT ATTTACCCAA 
    GGAGAACAAA AAAAAAGTCC CCCCCCTTCC CCGGCTCCCC CTCCGGACAT 
    CAACCTGGGC CCGGCTTGAA GGTCCCCCAC ATAAAAACCT CGGCCCCAGG 
    GCTCCCACTT GTACCTTGAA ACAAAACCCT CCCTCAGGGT TAACCACTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 662859 [Map]; Strand: w
      • AT4G01530.1 - [+] show detail - transposable element gene
        Distance: -549; Region: promoter
    Flanking Genome Sequence: GT19629 - 5-prime edge 
    TTTCGTACGT ATTACCCTTT TTTAAGAATA TGATGTCAAT GTATTGATGT 
    TGATTTCTGT ATAAACGAAC ACAATACTTG AGAATTGTGT ATTTTTTTTT 
    TCTTTTTGGA AACAAGGGGG GAATTATTGT TCCAAACTAT TTAAGAATTC 
    AAATATCACC GTCCTTTTAT TTAACGGCGG TTTAATTTCC CCAAACAAAA 
    CAAAAACGGT TGAAATAACG TTAAAGGGAA CATTAATTGG AAGGGAAAAT 
    AACAAAAATA ACTTATTTAT ATAAAATGAT TCAACAACGT TAGGTTATTA 
    AAAACATCTA TACAAAAACA ACGAAAACAA ATAAAACCCG GAAAAAAGGG 
    GCTTTCCTTT GGCTCGGGAA CCCGGGGCCT TAAAAAGGAA CAATTTACCC 
    AAAAAAAACT AAAAAAAAGT CCCACCACTT CCCCGGCCCC CCCTCCGAAC 
    ATCAAGCTGG GCCCGGCTTG AAGGTCCCCC ACAAAAAAAC CCCGGCCCCA 
    GGGCTCCCAC TTGAAACTTG AAACAAAACC CTCCCCCAGG GTTA

AT4G01530.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26860.1); similar to 52O08_2 [Brassica rapa subsp. pekinensis] (GB:AAZ67547.1); contains domain NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED (PTHR19446:SF34); contains domain REVERSE TRANSCRIPTASES (PTHR19446)
Link
InterPro Scan - TAIR