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GT18997

CSHL Arabidopsis genetrap mutant lines

Original: GT18997

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18997

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 504997 [Map]; Strand: c
      • AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
        Distance: -490; Region: promoter
    Flanking Genome Sequence: GT18997 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TGCGACACCA AAATTATATA 
    AATATTCTTA TTTAAATGCG TTACACACAA AAGAAAAATT ATATAAAATT 
    TTACAAATAA ATGTATAGAG TTTTTAGTAT CATATGTATC ATACATATGA 
    AATTAGAGCT ATACCAAACT AACCAAGCTA GATTTAAATT CAGTTTGATT 
    ATCTTACCCT ATTTTTTTAA CCGAATATGA ACTTTTAACA CTCTAGGCTA 
    TAACATTGGG TGGTGACTTA TATTTCTTCT TTCTTCTCAC TCGACTACAC 
    TCTTTTTCAC ATGTCACTTT CAACTTCTCT CTTCTATTAC CTCACAAGAA 
    TTTCTATGTT TTTTTGATTA TTTTATATCT ATTAAAAAAA GTATAAACAA 
    TTAATTAAAA ATCTGGAATA TCCCAATTTT AGGGCTTTAT TGAGATAAGA 
    TATCAGTGGA AGTCAAAAAA GAATTTAATG T

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 504986 [Map]; Strand: c
      • AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
        Distance: -501; Region: promoter
    Flanking Genome Sequence: GT18997 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATGCGACACC 
    AAAATTATAT AAATATTCTT ATTTAAATGC GTTACACACA AAAGAAAAAT 
    TATATAAAAT TTTACAAATA AATGTATAGA GTTTTTAGTA TCATATGTAT 
    CATACATATG AAATTAGAGC TATACCAAAC TAACCAAGCT AGATTTAAAT 
    TCAGTTTGAT TATCTTACCC TATTTTTTTA ACCGAATATG AACTTTTAAC 
    ACTCTAGGCT ATAACATTGG GTGGTGACTT ATATTTCTTC TTTCTTCTCA 
    CTCGACTACA CTCTTTTTCA CATGTCACTT TCAACTTCTC TCTTCTATTA 
    CCTCACAAGA ATTTCTATGT TTTTTTAATT ATTTTATATC TATTAAAAAA 
    AGTATAAACA ATTAATTAAA AATCTGGAAT ATCCCAATTT TAGGGCTTTA 
    TTGAGATAAG ATATCAGTGG AAGTCAAAAA AGAATTTAAT GTTAAAGAGT 
    TTCTTCTCTC TAATTTCATT TCA

AT2G02070.1

Model type
Protein coding
Short Description
indeterminate(ID)-domain 5
Computational Description
indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink).
Link
InterPro Scan - TAIR