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GT18851

CSHL Arabidopsis genetrap mutant lines

Original: GT18851

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18851

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22561651 [Map]; Strand: c
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 964; Region: intergenic
      • AT1G61200.1 - [+] show detail - homeobox-leucine zipper protein-related
        Distance: 1382; Region: intergenic
    Flanking Genome Sequence: GT18851 - 5-prime edge
    TCCTACTTTC TCTCTCTCGA CAAACTGATC ATACGATAAT ACGAGATTGT 
    TCATACCTAC TAGCAAAGAT ATGTTGAATG GCTTTTGTTG AAAATCCCTA
    ATCTCCATAT GAGTAATGCA GCTCGCCAAC CTTTGATCAT TTGATATTAG
    CTCCAAACTC AACTCTGTGG ATATCGTTAT GGTTCGAACT TGTAGATGCT
    CCAAGAGCTG CAGCTCCTTC ACTCAGCTTA CATCTCCATG AACATTAGAA
    TATAGTAGTT TCAATATTCT TAAACTCGAA AACTTTGGTA TTCCACTGAG
    ACTACCAAGT CTCTTTGCAC AATCCAAATT CAGCTGAGTA AGATTTTTCA
    ACTCTTACGC AATCTTCGGG AAACAGAGCA CAATATAAGA AACACGACTT
    GATATTTTCA TCCACCAAGC TATCGTAGCT GTACTTTAGA ATTGGAAAAT
    TTTTATTTTC CATGTCAGAA AAATCTGCAG CGGATGTAGA TGTAGTCAAA
    ACATCGATTG CATGCTCCCA TTCTTGTACC ATAGTTTTAG ATGCCATCTC
    TGTTGCCAAC TCCACAATAA CAGGATCTCT ACTTAATGTG TTGTCTCCCA
    CCATTGTAGA GATTCCCAAT CCTTGACTAT TGGTTTTGTG GTGGCTCTGT
    AGAGATTCCT AGATCTCTTT TCTGAGGGGA AGCATATTCA AATTCAATCC
    TTGATTTGAT GCTTAAGTGA TAGCGGAGAA AACGAACTGA GTCGTAAATC
    TAGTTAGAG

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61200.1

Model type
Protein coding
Short Description
homeobox-leucine zipper protein-related
Computational Description
homeobox-leucine zipper protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein-related (TAIR:AT1G20280.1); Has 18 Blast hits to 18 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR