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GT18808

CSHL Arabidopsis genetrap mutant lines

Original: GT18808

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18808

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3203409 [Map]; Strand: c
      • AT3G10340.1 - [+] show detail - phenylalanine ammonia-lyase 4
        Distance: -604; Region: promoter
    Flanking Genome Sequence: GT18808 - 3-prime edge
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAACACA 
    CAATTAATGC AGATAATAAA TGAGTTGTAT ACTTGTATTA GCTTTTTTAG
    GTATATGACC GTTCGACAGA AATAGTAGTC GTGTGAATGC AACAATCGAA
    TGAGTTATAG ACACACAAAA AGACCTAACG TATTCAGATT CTATAAAAAG
    ATACCTACCT GGTGGTAGTA ATAAATGACA TTCTATCAAT TATACGATCT
    GGATAAGATT TGGTATAGGA GCTATATATT AATGGAATTA CTAAGTTTTC
    TGAAACTACA TGTCAGAACC ATTTCATGCA AAGAAAGTTG ATTACGAAAA
    AATAAAGTTT TATATGGTTA AGAAAATTAA TACTTTGTAA AAAAAAAT

AT3G10340.1

Model type
Protein coding
Short Description
phenylalanine ammonia-lyase 4
Curator Summary
Encodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).
Computational Description
phenylalanine ammonia-lyase 4 (PAL4); FUNCTIONS IN: ammonia-lyase activity, catalytic activity; INVOLVED IN: L-phenylalanine catabolic process, biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4898 Blast hits to 4876 proteins in 1415 species: Archae - 40; Bacteria - 2975; Metazoa - 80; Fungi - 127; Plants - 1177; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink).
Link
InterPro Scan - TAIR