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GT18712

CSHL Arabidopsis genetrap mutant lines

Original: GT18712

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18712

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13855564 [Map]; Strand: c
      • AT4G27810.1 - [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18712 - 3-prime edge 
    TTCCCGGAGC TTCCTCCCAT AGAAAAGGTA CTGATCCAGC GATGTTCACA 
    GGCGGCGTCG CTAGCCCTGG AGTGTCACAT GCTCTGTTAA ATGGAATCGA 
    GAACAAAGGA AGCTTACGAG TCGCACAAAA CCGTTCTTGA TCATCAAATT 
    CAAAATCCAT CGCCTTGTTT TTCTGAATAA GAAACTTTCT TTGACGTTAT 
    ATGAAATGGG TTGGGATTTA AATAGATAGA GACGGTATAT TTTGGTTTGA 
    GTTATATGAA CACAAGAAAA GGGAAAAGAG AGGATGAATA ATGTGAGGAA 
    GTGTGTAGTA TTTTATGAAG CTGAAAGAGA AAAATGAACA AAACGCTCCT 
    TGGGGCGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13855748 [Map]; Strand: c
      • AT4G27810.1 - [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6...
        Distance: -30; Region: promoter
    Flanking Genome Sequence: GT18712 - 3-prime edge 
    CTTTCTTTGA CGTTATATGA AATGGGTTGG GATTTAAATA GATAGAGACG 
    GTATATTTTG GTTTGAGTTA TATGAACACA AGAAAAGGGA AAAGAGAGGA 
    TGAATAATGT GAGGAAGTGT GTAGTATTTT ATGAAGCTGA AAGAGAAAAA 
    TGAACAAAAC GCTCCTTGTG GCGC

AT4G27810.1

Model type
Protein coding
Computational Description
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR