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GT18331

CSHL Arabidopsis genetrap mutant lines

Original: GT18331

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18331

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17294311 [Map]; Strand: c
      • AT2G41470.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -562; Region: promoter
    Flanking Genome Sequence: GT18331 - 3-prime edge 
    TATGGAATCT TCTTAGATTT CTTGAAACGA GAAGAAGTCT ACATTGCAAG 
    GAAGTGTCAG CATCCTTGTC ATTATCCAAT GAACATCTCC GGGGCTCATC 
    TAACCCAAAG ACTGATTCCT TGTCGGTGTG GCAAACAAGC TAAGAAATTG 
    AGTTATATTG TATATGTAAC GTTTTCCACA TAATCTTCGT ATACTTAGCA 
    CTTGTTGTTC CGTGGCTCTT TCAATTCAGG ATCTTGGAAT ATCATCTTTA 
    GCCTGCGACC TTGGTAAGTA CAAGTGCGCG GTGGTGTATA CCGTGGCCAA 
    CAAGCGGACA GTAGAAACAT GCTCGGGGCA TGAGTTGTGT GCATTCTGAT 
    GAATCTCTCA TCTTGGAACA ACGAACGCCA GCTTTTGCAG ACACATCTAA 
    ACCGTAGCAA GTATTTAACC GGAACCTTTG CAAGTATCTC AATGACCAAG 
    TCAAAAGCAA GTTCTGCCAT CCTTGGGATC TAAACAATAA AACAAACTAC 
    AATAGAGATA TATAGACAAA ACTGAAACGA ANACCTTCAA AAGTAGAGAT 
    CCTCCTAACA TGCACCAATT GAGAGTTCGT TTGGTTGAGA TCTATGTATA 
    AACTTATGAT AAGGATGAAG ATAAACGGTT GTATAGGGTT TAGGGTTTAA 
    CTTGTATAAC AAGGGACGTA TTTTAGTCAC AAATCATTAC TTTCCCCAAT 
    TTATATGGTA TCAAAGCCAC CAAGACCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17294123 [Map]; Strand: c
      • AT2G41470.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -374; Region: promoter
    Flanking Genome Sequence: GT18331 - 5-prime edge 
    TTGACCTTAT CTGACATGGT TGCTGCTTTC TCTGATTTAT TCAAACCACC 
    ATTCCAAGCT TTTTTGGCTA AAGTCTTGAG TAGATTTTAG CTAGAGAGTC 
    ACAACATTAT AGAAATTTTA TAATCAAAGA ATTTATTTTG GTTAAAGTTT 
    ATAATAAAAG AATCTATTTT GTTAATTAGG TAAGGAAAGA CTATTTTTTG 
    TTTCATAATC AAAGAAACCA TGGGCCCGTC AAGGTCGAAA CCGGGTTTAG 
    AGGGTTCTAA AGAGGCCTTA AAACGCAGCC CAAATAAGCG CTTTTCTAAA 
    TAAACTCTTC TTATAAACGC AGCCCCAAAT AAACACGTTT TTATTATAAG 
    CTCTTTCAAT ATACACAAGC GGTGGGACAA AAAAAAACAT ATATATAGCC 
    ATATAGGGTT CAT

AT2G41470.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41440.1); Has 1066 Blast hits to 825 proteins in 144 species: Archae - 7; Bacteria - 46; Metazoa - 465; Fungi - 36; Plants - 67; Viruses - 4; Other Eukaryotes - 441 (source: NCBI BLink).
Link
InterPro Scan - TAIR