1. Home
  2. Mutant Lines
  3. GT18319

GT18319

CSHL Arabidopsis genetrap mutant lines

Original: GT18319

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18319

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2285065 [Map]; Strand: w
      • AT5G07280.1 - [+] show detail - Leucine-rich repeat transmembrane protein kinase
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT18319 - 5-prime edge 
    CTTTCTCCCT GCTGCTCTTG TAAAATTGAA ACTTTCTCTG TAAAATCGTC 
    TCTTTTAAAT CTCCGAGTTT TCTTCCTCCT TCTCTAAAAG AACATGGCGT 
    TTCTTACCGC ATTGTTCCTG TTTCTCTTCT TCTCTTTTTC GAGTTCCGCC 
    ATTGTTGATC TTAGCTCGGA AACAACTTCT CTCATCTCCT TCAAGCGCTC 
    ACTAGAAAAC CCATCTCTCC TTTCTTCATG GAACGTTTCG TCTTCCGCGT 
    CTCACTGCGA TTGGGTTGGC GTTACGTGTC TGCTTGGACG AGTCAACTCG 
    CTCTCCTTAC CGTCTTTGTC TCTGAGAGGC CAGATTCCGA AGGAAATTTC 
    GAGTTTGAAG AACCTTAGAG AGCTTTGTCT TGCCGGAAAT CAATTCTCCG 
    GGAAGATTCC GCCTGAGATT TGGAATCTAA AACATCTCCA AACCCTTGAC 
    CTCTCAGGAA ATTCTCTCAC CGGACTTCTC CCGAGGCTAC TCAGTGAGTT 
    ACCTCAGCTT CTCTACCTCG ACCTTAGTGA CAACCACTTC TCCGGTTCAC 
    TTCCTCCATC GTTCTTCATC AGCTTACCT

AT5G07280.1

Model type
Protein coding
Short Description
Leucine-rich repeat transmembrane protein kinase
Curator Summary
Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther.
Computational Description
EXCESS MICROSPOROCYTES1 (EMS1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR