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GT18193

CSHL Arabidopsis genetrap mutant lines

Original: GT18193

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18193

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10948728 [Map]; Strand: w
      • AT4G20270.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: -933; Region: promoter
    Flanking Genome Sequence: GT18193 - 3-prime edge
    CGTTACCGAC CGTTTTCATC CCTATATACA CATACTACCC GACCGGATCT 
    TATTCAGTAT ATAATTAACT CATAGAAATT TGTTGTGTTC CCCTTTTGAT
    TAGCACTTTG TAGAAATATG GAAATCCTCT ACATAGGTGA TCCAAATTTG
    AATAAATTGA ACTAAGATGA AAAACACATT CTTAAGCAAT CCAAATTTGA
    ATGAATTTGT GAGTCTAATA AACAACAAAT AAAGTAAAAC CAAATTACCT
    TATCGAATCA AAAAATAACT ACTATTTAAG CTTATTGTTT GAAGATCAAT
    GCTTTTTCTT ACGTGATTAA TGTCTATTCA GTCCATTAAA GGCAACCATA
    TTAAATTTAT TTTTTCTATT CGATTATTAG AAAAATAAGA TAATAAAGCA
    AAATAATTTT AAAACATTAT TAAAAAAGAA AAAAACAAAA AAATATTGGA
    AGGGTTTTAA GAAAACCTTA GAAATCGTAA AATATAAAAT TAAGAAA
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10948823 [Map]; Strand: w
      • AT4G20270.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: -838; Region: promoter
    Flanking Genome Sequence: GT18193 - 5-prime edge
    CAAGCGTATG TACAAAATTA GCATATGCCA TAGGTAAATT TAAAGCTTGA 
    AAGTATCATT TTATTTGCAG GAAGCGGCAA TTTAGTAAGA AGTAGTCAAA
    GTATCATTTA CCAAAAGTAT ATGGTTTTGG GAAGAGTTGT TAGGGATGTA
    TTCTTTCTAA ACAGATGATA TGACGATGTT CTTGAAAACT AATGTTAAAG
    ACGGAATCTC TCGCATCTTC ACTCGGGAGA TATATTAAAC CGTTGATTGT
    AGTTAGCCAT GTACTTAGCT TAGTGCACAA ATAATCTGCT GCAAGAAATC
    TTTTTCTATT ATAATATCTC TCATTTAAAC ATTAGAACAT ATTGTTTAAC
    TTGTTCTTCT AGAAATAAAA CTGCTAATTT CCTCTGGTAA ACTATTTTCC
    TTTAGATT

AT4G20270.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Curator Summary
Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.
Computational Description
BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink).
Link
InterPro Scan - TAIR