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GT18174

CSHL Arabidopsis genetrap mutant lines

Original: GT18174

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18174

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5169683 [Map]; Strand: w
      • AT1G15000.1 - [+] show detail - serine carboxypeptidase-like 50
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18174 - 5-prime edge 
    CTACTTTCTC CCTGGCTGTA TCAAGGTATG CTTGATCTAA GAGACGGCGT 
    CGTTTCGACG GAGGAGTGGA TGAAGACTAT GAACTGGTCA GGATTGGGAA 
    TGTTCTCGAC GGCGGAGAGG CGTGTGTGGA AGGATGAAGA CGGTGTGGTC 
    GCTGGTTATG TTCAGAGATG GGGGAATTTG TGCCACGTGG CGGTTACAGG 
    AGCTGGTCAT TTTGTTCCGA CAGATAAAGC TGTGAATTCA AGGGATATGA 
    TTGAAGGTTG GGTTTTGGGG AAAGGATTGT TCGGTGGTAA AGATGTGAAG 
    CAGACAACTT CGTCGAGCTT ATACCATTCA ATCTAAATAT TGTGTACTTG 
    TACTTAGTTC TGTAAGATTC AATTCAGATT CTAATTGTAC TCTGGATTTA 
    GATTTGTTAC GTCATGTTCA CCAGTTC

AT1G15000.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 50
Computational Description
serine carboxypeptidase-like 50 (scpl50); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3616 Blast hits to 3489 proteins in 407 species: Archae - 0; Bacteria - 288; Metazoa - 703; Fungi - 860; Plants - 1378; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).
Link
InterPro Scan - TAIR