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GT18148

CSHL Arabidopsis genetrap mutant lines

Original: GT18148

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18148

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12160953 [Map]; Strand: c
      • AT4G23230.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 15
        Distance: -683; Region: promoter
      • AT4G23240.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 16
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT18148 - 3-prime edge 
    GAGGTATTTA CCGACCGTTA CCGACCGTTT TCATCCCTAT ATACACATTC 
    TACCCGACCG GATCGTGATC GGTATATTCA TATCACTCGA CAATAATCTC 
    CAGAGTCATT ACTCCGAAAC TATAAACATC AGATTTCATC GAGAACTGCC 
    CATTCGCCAC ATACTCTGGA GGCATGTAAC CGCTGCAAAA CACAGCACAT 
    ATCACTTTTA GTTTGATCAG AAATCAAAAT AAAGGAAAAA GGACAGACAG 
    AATGTAAGTG AAATGGAAGA TTATTTACAA TGTTCCAACT ACTCTTCCTG 
    TATTGTCTTC AGTCTGGTCC ACTCTGAAAT TCCTTGCCAT TCCAAAATCC 
    GCGATTTTCG GATT

AT4G23230.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 15
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 15 (CRK15); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 121584 Blast hits to 120147 proteins in 4447 species: Archae - 110; Bacteria - 13930; Metazoa - 44451; Fungi - 10585; Plants - 34122; Viruses - 456; Other Eukaryotes - 17930 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23240.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 16
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 16 (CRK16); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (TAIR:AT4G23290.1); Has 114939 Blast hits to 113657 proteins in 4192 species: Archae - 100; Bacteria - 13362; Metazoa - 42416; Fungi - 9590; Plants - 32458; Viruses - 412; Other Eukaryotes - 16601 (source: NCBI BLink).
Link
InterPro Scan - TAIR