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Mutant Lines
GT18117

GT18117

CSHL Arabidopsis genetrap mutant lines

Original: GT18117

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18117

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 23455254 [Map]; Strand: c
  - AT5G57930.1 - [+] show detail - Arabidopsis thaliana protein of unknown function (DUF794)
    Distance: 0; Region: exon3 (CDS)
  - AT5G57930.2 - [+] show detail - Arabidopsis thaliana protein of unknown function (DUF794)
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: GT18117 - 3-prime edge
```
TTTACCGACC GTTACCGAAC GTTTTCATCC CTAGTCCCTA TTGTGGACCT 
GAGACGAGCT GCGAGAGGAG AGAGTCAAGA ACAACAAAGA CAAACCTAAG 
AGACCTCTAC CTCCGCCTAA AAATGGTATG GTTGTGAAGA GCCTTGTGCC 
TCTTGCTTAT AAAGTATACA ATGCAAGAAT CAGATTGATC AACAATCTCC 
ACCGGCTTAT GAAAGTTGTT CGTGTTAATG CTTGTGGGTA AAAATTCTCT 
TC
```

5 prime edge [+] show sequence

Chromosome: 5; Position: 23455135 [Map]; Strand: c
- AT5G57930.1 - [+] show detail - Arabidopsis thaliana protein of unknown function (DUF794)
  Distance: 0; Region: exon3 (CDS)
- AT5G57930.2 - [+] show detail - Arabidopsis thaliana protein of unknown function (DUF794)
  Distance: 0; Region: exon3 (CDS)

TACTGCTTAG GTAAGTCTTC ATTCTAGGTC GACCACATTT CTCACAACTA 
ATGGCAGAGA TCGACGCTCT TTACTAAGCA CAACTCTTGA ATTCAACTGA 
AGGCTAAACT CAATGCTACT TCCCTGCACA ACATATCCGC ACATAACAGT 
AAACATTGAC TCTCTACTTC AAAGGGAAGC AACGAAGTGT GGTCTAATTC 
TAAGAACCAA AACAACAACG AAGCAGAGTC TGGAGAATTG GATGATACTG 
ACTAGTAAAG GAATCTGACC TGAAGAGAAG GAGAGAACCC AAATCTATAA 
AACGTGTTGG GATTAAGAAA TTGCCTCCTG GTTACGCTAT GAATAGCAAA 
AGGTACACTT TTTGGTGAAA ACCCAGAAAC TGTACTAGCT GGATAAAACA 
ACGGAAACCA AAATCAATCA CAGTCTCACA ATAAATGGAT AAAATTGAGC 
ATTGAGGACG GATTCGACAC ACAGTGAGGA AGAAACTTAC AGGAAATAGC 
GGAGTACGTT ATCGACAT

AT5G57930.1

Model type: Protein coding
Short Description: Arabidopsis thaliana protein of unknown function (DUF794)
Curator Summary: ACCUMULATION OF PHOTOSYSTEM ONE 2
Computational Description: ACCUMULATION OF PHOTOSYSTEM ONE 2 (APO2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT1G64810.2); Has 141 Blast hits to 119 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57930.2

Model type: Protein coding
Short Description: Arabidopsis thaliana protein of unknown function (DUF794)
Curator Summary: ACCUMULATION OF PHOTOSYSTEM ONE 2
Computational Description: ACCUMULATION OF PHOTOSYSTEM ONE 2 (APO2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT1G64810.2); Has 139 Blast hits to 117 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR