Home
Mutant Lines
GT18112

GT18112

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT18112

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 22507293 [Map]; Strand: c
- AT5G55560.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 0; Region: exon2 (CDS)

AGCCTTTGAC CAAGAAGAAG GCATCGAGGT GGCTTGGAAC CAAGTCAAAC 
TGAGATGTTT TTCGGATGAT CCAGCCATGA CCGAGAGGCT TTACTCGGAG 
GTCAGGTTGC TTAAGAACCT TAAGAACAGT AACATCATCA CCCTGCTATA 
AAGTGTGGAG AGACGAGAGA AACAACACCT TGAACTTCCN NCCAACTCGA 
CGATTTGGAC CGCAAATTGA CCAATTCTTT TTAAATTAAT TTAACAATTT 
ACTTGGAAAA TTTTATTTAA TCCCAGGTAA ACCGGGTAAA AATAATAACT 
CAAATAATAG GGTACCAAAT ATCGTTTTTA GGTAAAAAAT TGGCCTAAAC 
AAATCGGGGC CAACAATTTG GAAAAACCCT GGAAGAGTCC ATTTCCGAAT 
AGGGTTGGAA AACCGGGGGA AAAAAAGAAA GAATATTT

AT5G55560.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 3 (TAIR:AT3G48260.1); Has 100897 Blast hits to 100061 proteins in 3189 species: Archae - 71; Bacteria - 9572; Metazoa - 37309; Fungi - 9559; Plants - 27616; Viruses - 356; Other Eukaryotes - 16414 (source: NCBI BLink).
Link: InterPro Scan - TAIR