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GT18092

CSHL Arabidopsis genetrap mutant lines

Original: GT18092

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18092

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3053159 [Map]; Strand: c
      • AT3G09925.1 - [+] show detail - Pollen Ole e 1 allergen and extensin family protein
        Distance: -375; Region: promoter
      • AT3G09930.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: -101; Region: promoter
    Flanking Genome Sequence: GT18092 - 5-prime edge 
    CCGATCGGTT TATTCGGTTT AAAGGGAACA CATATAAAAG CCAAAAAAAC 
    CTTAAATGTA AGTAATAATT CTCCTTTCAA AAAAAAAAAA GGGTTCCTTT 
    TTTTTTTAAA AAATTTTTTC CCCCCTTTAG GGGGTTTCCC CCTGGTTGAA 
    AATTTTCCCC CTTTCCCCGG GGGTTTTTTC AAAAATTTTT TAAATTGTGC 
    AAGCCCACAC AAAAAAAGCC TGTTTTAAAT TTTTTTATGA AATAAAACTC 
    ATAATGTTAA CGAAATGAAT TATTAAATGA TTGAGACCAT AAATGGACCG 
    CACGTATAGT AGTGCCCTTC CACACATGTA ACGTAATCTT CTCCTCAACC 
    AAAAAGTCTA AATTCATATT ATATATACAC GAAGACTTTC TTACATCAAA 
    GAAGCACAAT CTGAAAATCA TCGAATCCAA AATAGTTGAA GTCGTCATGG 
    CGCAGAGGAT CACAACATTG GTTCTGCTAA TAGAGATATT GTTTCTG

AT3G09925.1

Model type
Protein coding
Short Description
Pollen Ole e 1 allergen and extensin family protein
Computational Description
Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT5G05500.1); Has 222 Blast hits to 222 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09930.1

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT5G03610.1); Has 3152 Blast hits to 3125 proteins in 151 species: Archae - 0; Bacteria - 220; Metazoa - 0; Fungi - 3; Plants - 2916; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR