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GT18085

CSHL Arabidopsis genetrap mutant lines

Original: GT18085

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18085

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9242209 [Map]; Strand: c
      • AT3G25490.1 - [+] show detail - Protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT18085 - 5-prime edge 
    ACCTCCATTT TTAGTTCATC TACAGATAAC ACAATCACTG AATCACTGTC 
    CTGGACTGCA AGTTTATAGC AACGATGGAG TTGTTAGGCA ATATCCCTTT 
    GTAGACTGTC CCTTGGCCTC TTTGACCCAA GATTCTGCTC ACATCATAAC 
    CATTAGTTGC TTCCTTCATG TCTTCCTCCG TAAAGATTTT GAAATCAATG 
    TTTGAAGGAC CCTGCACCCG AGACTCGCTC TATCAACATG CCACCACCAT 
    TTTTATCAAA GACTAATTGT CGTTGGATCT TGGTGTCCTT CTGGTGCTTC 
    CTGATGTTTT TTATATAGCT AATGCTACGC ACGAGGCTCA AAATG

AT3G25490.1

Model type
Protein coding
Short Description
Protein kinase family protein
Computational Description
Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase 5 (TAIR:AT1G21230.1); Has 117108 Blast hits to 115788 proteins in 4370 species: Archae - 143; Bacteria - 13531; Metazoa - 43249; Fungi - 9742; Plants - 32887; Viruses - 438; Other Eukaryotes - 17118 (source: NCBI BLink).
Link
InterPro Scan - TAIR