1. Home
  2. Mutant Lines
  3. GT18047

GT18047

CSHL Arabidopsis genetrap mutant lines

Original: GT18047

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18047

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17605300 [Map]; Strand: w
      • AT1G47810.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 741; Region: intergenic
      • AT1G47813.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1258; Region: intergenic
    Flanking Genome Sequence: GT18047 - 5-prime edge 
    CCTACTTTCT CCCTGTTTCA GAGTTATTTA TGGACACATC AATTTTAAAG 
    GTACAGTTTG CAAAAAAAAA GTTAAGCCAA AAGTTGATAA CATGACAATC 
    GTAACGAGGA GAAATCAAAT ACGAAGTTGG ACAATAACAG ATTTTATGGT 
    CGATTAGCGA ATAAGACTAC TCTTCTAAAA GCATCGTCAA TCTCCGTTCT 
    AGGGGTTTTT TAAGTGTATG GCACATACAG CTGCGTATAT GATAATTGTG 
    TTCTAGTAGT TCTGTAAATA TCTTTGTAAT AACGTTTTTA AATCACAAAA 
    GGTTTGTCGG GAATATATAT TATCTATATA TACATTTTGG CAGCCATTTT 
    GTAAAATAAA TCCTGGAGTT ATAACTTATT TACAATGGTT GCCACTAACT 
    TTTAATTATT GATTTTCTTT GGGCAATAAA TTGATTAACA AACAAAAAAT 
    ATTCTAAATA TATTCCAATT CAATATATCA CGCAGATTTT TCCAAAATTT 
    GAACTAGATT TCGGAAATTA TTTAAAACAA AAATATTTGA CAAACCAAAA 
    TACAATTGCA ATCCCTTAAA ATGAGCAAAA CGCACCTAA

AT1G47810.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G47800.1); Has 1083 Blast hits to 1020 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1083; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G47813.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47820.2); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR