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GT18005

CSHL Arabidopsis genetrap mutant lines

Original: GT18005

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18005

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5676071 [Map]; Strand: c
      • AT2G13610.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: -240; Region: promoter
    Flanking Genome Sequence: GT18005 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TATTGGAGAG 
    TAGAGAGAGG TTCACATGCA GTTGTTCTTC ACACTTCTCT TTAACTTTCC 
    CAAGACATGA AGAGTCATCG TGTTCCTTTG TGATATTATT TATATATTTA 
    CTTTCATATT TTGTAATATA CTTGTGATTT CTTCATCAAT TTATAATTTT 
    TAAAAAATTC AATTAATATT AATAAAAGTT ACCGACGGCT AATTCTCAAA 
    ATCACTTTTT TTTTCTTTTC GGCAAATCGA TTTACATGAA ATATAAAAAG 
    CTTTCAAAAA CAACCTTTGA AACAAATAAA GAAAATTAAA CACATTTTCG 
    ATAAAAAATA AATAGAAGTA ATCTTGCTTT CTATACGGAA GTTTTATAGG 
    CAATAGATAA AATCTGTAAA ATCTCTTCTT TATATCCTCT TAAAAAACTA 
    ACATCTTATA GATAAAAGTT ACAAAATATT TTTCTCATCA CTCTCATTAA 
    AAAAATACAT TGATATGTTG CTTGAAATGG TTTTT

AT2G13610.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G53270.1); Has 407800 Blast hits to 367819 proteins in 4141 species: Archae - 7220; Bacteria - 321377; Metazoa - 9869; Fungi - 7399; Plants - 5931; Viruses - 18; Other Eukaryotes - 55986 (source: NCBI BLink).
Link
InterPro Scan - TAIR