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GT17902

CSHL Arabidopsis genetrap mutant lines

Original: GT17902

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17902

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18290518 [Map]; Strand: w
      • AT3G49320.1 - [+] show detail - Metal-dependent protein hydrolase
        Distance: 0; Region: exon1 (CDS)
      • AT3G49330.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -970; Region: promoter
    Flanking Genome Sequence: GT17902 - 5-prime edge 
    CCTACTTTCT CCCTGATTGG AACGACGAAG GATGAAGCAA GCTAAAGCTT 
    CGTCGCAGTG GAATGTTCCA TTATGGGTCC CAACACGTTT CGTAGAGAAA 
    CTAGCTCGGA AGTTTGAAGA ACGTTTGAGA AACAGAGAAC GATTCCAGAT 
    TCTGCTGCAA CAGAGACCTC TTGACCCAAA CATGGCTAAG AGAGAGAAGA 
    AGAAGCTCTT CTACAACTAA ACCCTCGACG TCGCGGGTTT AAGCTTGACA 
    TTATAACGCC GTCGTTTCGT CAACTTTGGG ATTTGATAAA ACGACGCCGT 
    ATGTGTTTTC TTTGTGAAAG ACTAAAATGA CGCCGTTTGA ATTTTACATT 
    TTTGGAATTA TTTTCTTAGG GAATCTTCTA ATAGAGTTGA TGATCTTTGG 
    TTGACCTACC AAATATGGTT GATCACCACA CTGACCACAG TTTGGTTATC 
    AATTATCAAA ATTCTGTTTA TATCATATTA AAGTGATTTC ATGTACCAAA 
    TGTATTGTTT TAATCGTGGG ACCTTAAGTT ATAATCATAG AAAACTCAGG 
    ATCAAATCCA AATGACAATA CAACAATAAA CCAATGGATT ATCATAATTG 
    CATAAACACT CTCACTTCTG GATAAGTTTG TTCATAACAA ATTATTAACA 
    TGACAAAATA GTACTATTAA AGTAATGCAA CCCACATTAC TTTGGAAAGA 
    CTTCAAACCA AAGGAATTGA GAAATGTGGT CTATAAGCAA TAACATCATT 
    GTCTTCAACC AAATCACCAA CATATTTT

AT3G49320.1

Model type
Protein coding
Short Description
Metal-dependent protein hydrolase
Computational Description
Metal-dependent protein hydrolase; CONTAINS InterPro DOMAIN/s: Metal-dependent protein hydrolase (InterPro:IPR003226); BEST Arabidopsis thaliana protein match is: Metal-dependent protein hydrolase (TAIR:AT5G41970.1); Has 666 Blast hits to 662 proteins in 329 species: Archae - 0; Bacteria - 214; Metazoa - 145; Fungi - 141; Plants - 55; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G49330.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G24370.1); Has 41 Blast hits to 41 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR