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GT17901

CSHL Arabidopsis genetrap mutant lines

Original: GT17901

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT17901

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2563533 [Map]; Strand: w
      • AT5G08000.1 - [+] show detail - glucan endo-1,3-beta-glucosidase-like protein 3
        Distance: -21; Region: promoter
    Flanking Genome Sequence: GT17901 - 5-prime edge 
    CCTACTTTCA TCCTGCACGG AGGAGAGCTA CAATAATGAA AAAGCTGACT 
    CAAGAAGGGC TATAGAAGAA ACAAGAGTCA CGGAACAAGT TGTCACTCTC 
    AATCTCCAGT ACACTAGCTT CCATAACTCT CTCTCTTTCT CTCTTTCTTC 
    TCACTCGACG AGNNATCAGA ATAGAAATCT CTCTCTCTCA ACAAGTCTAA 
    CAGTGCCATT TGTATCTCTG AACTCCAACA TGGCTCCTCT GGTTCTCTAC 
    CTTCTCACTC TCCTCATGGC TGGCCATTCC AGTAAGAACT CTCACTGATC 
    TTCTTCACCT TTGTTTATGG ATTTGGTCTC TCAGTCTCAC TCTCGCTTAC 
    CCTTTCACAT TCA

AT5G08000.1

Model type
Protein coding
Short Description
glucan endo-1,3-beta-glucosidase-like protein 3
Curator Summary
Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.
Computational Description
"glucan endo-1,3-beta-glucosidase-like protein 3" (E13L3); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 1 (TAIR:AT5G61130.1); Has 1582 Blast hits to 1532 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 10; Fungi - 147; Plants - 1404; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR