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GT17771

CSHL Arabidopsis genetrap mutant lines

Original: GT17771

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17771

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3546282 [Map]; Strand: c
      • AT3G11310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1949; Region: intergenic
      • AT3G11320.1 - [+] show detail - Nucleotide-sugar transporter family protein
        Distance: 364; Region: intergenic
    Flanking Genome Sequence: GT17771 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTCACA CGGGTACTTA 
    TGGGTTGGCC TTTATGATTG TGTGTTTGGA TCATTAGTCA AATATGCTCT 
    CTTATTCTCT TGAAAAGATT TGAAATGTAA ATGATATGAC ACAAGACAAA 
    ACATTGTTGC AGAAGAAATA TGACTCTTGA CTCGTTTTGT CTGGTCTCTT 
    TTAAGTTCTC CTTTGTTTTG CTCCCTCCCT TTTGACTCTG CTTCAAGAAT 
    TTATGGCAAT ATAAACACGT TAACAACCCA GCCTAGAACC TGTGACTATT 
    TCAAGAATCT TTGGCAAACA ATATGAACCC AACCTCTGAC TTGAGATCAT 
    AAACCACTGA ACTGCAGAAC ATAAGTTGGA TTTACAGAGA GTAGTAAGAA 
    CTAAAAACAG GTGGAAGAAA AGAAAAAAAG CTTTGTCCTC TTCCATTAAT 
    TAATCAGTGT TGTAAAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3546215 [Map]; Strand: c
      • AT3G11310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1882; Region: intergenic
      • AT3G11320.1 - [+] show detail - Nucleotide-sugar transporter family protein
        Distance: 431; Region: intergenic
    Flanking Genome Sequence: GT17771 - 5-prime edge 
    CCTACTTTCT CCCTGCGTGT GAGAGAAGTA AGGGTTCCAG AGCTTTGATT 
    CTCTCTTAAC TCTGAGGTTG TGATTAAAGT TTATGTTAAA CTTCTTTTAG 
    ATGGTCAAAA TGAGATATCT ATGGTACTGA CCAAAAGAAT TAATAATTCA 
    TTTATGTTTA GAAAGTGTTA AAATGTTCAT TTTCTACAAA GGTGATATAT 
    TACAAAATTA CACTACTTCT AGCAGAGTCG GTGAAATGCT AAATTGATAA 
    AACCATGTAA ATTGATCTAG TTTAAATGT

AT3G11310.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11320.1

Model type
Protein coding
Short Description
Nucleotide-sugar transporter family protein
Computational Description
Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G05820.1); Has 3089 Blast hits to 3084 proteins in 315 species: Archae - 10; Bacteria - 135; Metazoa - 742; Fungi - 470; Plants - 1357; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink).
Link
InterPro Scan - TAIR