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GT17765

CSHL Arabidopsis genetrap mutant lines

Original: GT17765

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17765

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3546275 [Map]; Strand: c
      • AT3G11310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1942; Region: intergenic
      • AT3G11320.1 - [+] show detail - Nucleotide-sugar transporter family protein
        Distance: 371; Region: intergenic
    Flanking Genome Sequence: GT17765 - 3-prime edge 
    TAGAGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT ACTCACACGG 
    GTACTTATGG GTTGGCCTTT ATGATTGTGT GTTTGGATCA TTAGTCAAAT 
    ATGCTCTCTT ATTCTCTTGA AAAGATTTGA AATGTAAATG ATATGACACA 
    AGACAAAACA TTGTTGCAGA AGAAATATGA CTCTTGACTC GTTTTGTCTG 
    GTCTCTTTTA AGTTCTCCTT TGTTTTGCTC CCTCCCTTTT GACTCTGCTT 
    CAAGAATTTA TGGCAATATA AACACGTTAA CAACCCAGCC TAGAACCTGT 
    GACTATTTCA AGAATCTTTG GCAAACAATA TGAACCCCAC CTCTGACTTG 
    AGATCATAAA CCACTGAACT GCAGAACATA AGTTGGATTT ACAGAGAGTA 
    GTAAGAACTA AAAACAGGTG GAAGAAAAGA AAAAAA

AT3G11310.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11320.1

Model type
Protein coding
Short Description
Nucleotide-sugar transporter family protein
Computational Description
Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G05820.1); Has 3089 Blast hits to 3084 proteins in 315 species: Archae - 10; Bacteria - 135; Metazoa - 742; Fungi - 470; Plants - 1357; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink).
Link
InterPro Scan - TAIR