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GT17496

CSHL Arabidopsis genetrap mutant lines

Original: GT17496

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT17496

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21311161 [Map]; Strand: c
      • AT1G57540.2 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: exon1 (CDS)
      • AT1G57540.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (CDS)
      • AT1G57540.1 - [+] show detail - unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; ...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17496 - 3-prime edge 
    CGTTACCGAC CGTTTTCATC CCTAGTTTCA TCTCACTCGA CACATGGCTT 
    AGCATCTGAT CTCATCAGAT CTCCTTCTGA CCATCCTAAC TTCTGCCTTA 
    ACGCCATTTC TCTCTGTAAT AACAACACCA AATTAATTTA AAGTATAAGA 
    GAAACGAAAC TATTCGGTTT TGTGATTAAG ATATTCACTG AGGCATTTCA 
    TCGAGCAGTA TAAGGGCAAC TTCAAAAACG AGCAACAGAT ATAATAACTC 
    TATATGGGTT AAGATCTAAG CAGTAAAAAA GAGAGCAGAA TTGGTACATA 
    AATACCAGAA GCAAAGCAAT CTCTGTCGTT ACCGGTGATG CGTAGTTTCT 
    TTGGCTGTGT CGCCGTCGAG CTTGTCGGAA GAAGACGGAG AAGAGAATCA 
    GATCCACGTG TCTAATTAGC TGATATTTGG AAGCCCAATA AGTGTTGACT 
    ATCTTAATGG GGCGGACACA ATAATCGTCG GATCCAAGTG

AT1G57540.1

Model type
Protein coding
Computational Description
unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G57540.2

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G57540.3

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR