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GT17387

CSHL Arabidopsis genetrap mutant lines

Original: GT17387

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17387

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9950990 [Map]; Strand: w
      • AT1G28360.1 - [+] show detail - ERF domain protein 12
        Distance: -858; Region: promoter
    Flanking Genome Sequence: GT17387 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGACGTAA TCCCTAGTAC 
    TGATAATAGC CATCTCTCTC TATCTTTTGT ATCTTTCACT CTATTATTTG 
    ACAAGTATTT AAATGCTCTC TTTTGGGGTT TTATTGGCAC CCATATATAT 
    TTATGATGCA CGAGGACAAG GCTACAAGGA GATCATTAAA TAAAGTTACT 
    TGACACAACT ACTCTATCTT TAGCTCTGAC TGATTTTGTT TTTCTTTTTG 
    TCCAAAATTC ATTAGCCCAT CTTATGCAAA CTTACTATAC TCTCTAGTCT 
    ATACTAATAG AGTAGATTAC ATAGGCTCTT TCTTTTCCCT CTAAAAAGTG 
    ACGTAGTTTA AGTCTTTATA TTGTGTAAAA TATATAGTAA TCATAGGAGT 
    CAAAAATTTA TAGCAATTGA AGTGGCTTAT AATTTTCAGT AATAGACAAT 
    GAATTAAAAC AAATTAGTTA GAGGTTTTTT GTTTTTGTTT TATCAACTGA 
    AGTTTGATTA GATTAATTTG TCTTTTAACT TCTCTATTTC TTGACATTTT 
    GTAAGATGTT TTTGTTTGGT TTTAGGGTTA TTTAAAAATA AATAAAAAAA 
    TCTGTGTTTC CTTTTCACGT GACAAGGCTT AGGGTCTGTC GTTTTGATTG 
    AACAAATGCA TTGGTCCATA TCTAACAAAA TTTATACACG TGCGAACTCT 
    GATGTCTGAC TTCTCTCTCT CTGACATATC TAATTATTTA AATTAACCCT 
    ACCTATAAGC ACAGTAACAA AAAGAGAGAT ACCCCAAAGC TATATAAGCT 
    ACTACAGTAC TAATAATCAT TTTCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9951071 [Map]; Strand: w
      • AT1G28360.1 - [+] show detail - ERF domain protein 12
        Distance: -777; Region: promoter
    Flanking Genome Sequence: GT17387 - 5-prime edge 
    TGATTACGTC AGCATCCCTA TGCGACAGGT TCAGTCAAAG AGGCGGCCCA 
    TTTTTCTTTC CTCTTCGTAA ATGTACAAGA TTATTTATTT TTAGTTCTTT 
    TTTCTTTGAT CATTTTGTAT CAATGGTTGC TGTGAGAAAA AGCATCGAGA 
    TTGTTACGAT CGAAAACAAA GTACTTGAAT TATGAAACAA ATGTTTGGAG 
    AGCCTATGCA AAAATGATCT TTCTATCTTC TTTTTATAAT AGCATAAATT 
    TCATAGTATG GCATTATCGT CACTAGCAAG TAATGAGTTA ATTTACCATA 
    AGTTACAACG GTAATGAGGT TGTTTGGAGA GTAGAACTAA AATATTTTAT 
    TTCTAACCAT TACCTAACAA ATCTTTTTTA TATAACAGAA GTTGTAAATG 
    GTAGATAAGA AAACAGTATT AGCACTCAAA GGAATGATTA GCATTGTTTT 
    CTTTCATGTC CTAGAATAAG TCCACTCACC ACTAGAAGTA TTCACTTTAT 
    GAGAAATCCT ATTGTATTTT TTCAAATACA TCAACTTATT AAAACAACAT 
    TATTTTGGTG TAGAACACCC ACGTGTAACA ATCTCTCAGC ATACCACCGT 
    CACATCACCC AACAGCAAAA GATCGAACGG TGCTTGATTC TTGCAAACCC 
    CAGAGAAAAC CTCGATCCTA GAAATCAAAC ACTATTCAGT TTTGTTTTTA 
    CTATTAACTT GCCATATATA TTACGTATAG GCAACAAATA AAGATAGATA 
    ATCGTCA

AT1G28360.1

Model type
Protein coding
Short Description
ERF domain protein 12
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Computational Description
ERF domain protein 12 (ERF12); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5550 Blast hits to 5447 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5541; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR