1. Home
  2. Mutant Lines
  3. GT17159

GT17159

CSHL Arabidopsis genetrap mutant lines

Original: GT17159

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17159

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1005922 [Map]; Strand: w
      • AT2G03300.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain family protein
        Distance: -1700; Region: intergenic
      • AT2G03310.1 - [+] show detail - unknown protein; Has 17 Blast hits to 17 proteins in 6 species: Archae - 0; B...
        Distance: 334; Region: intergenic
    Flanking Genome Sequence: GT17159 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTAAG 
    AGGCACCGCA AGAAGGAATG CGGTCTTTAT GTGCTGATAT GCATATGCTC
    TTTGGGTAGC TTGGATTCAC AAGTTGTTGT TTAGGAGACG ATCCTTTTGG
    CCTAAAAAAA CAGAGGTTAT TAATTAGTTA TAGATTTGGA GATCTCTACT
    TTGCACCGTG ATATGACAAT GCAATTTAGC AAATGCCACT AAAGAGAGTT
    GTGACCAGCA TATTTCTAAA TTTTTTTTTT TTTCCGGGGG CCCAAACCTT
    TGGGTTTCGG GGGAAAAAAA AAAACTTTTC CTTTTTAGAA AACCTCCCTT
    TTTTGGAAGG AAAAAAAAAA TTTCAAGGGG GGGGTTTTTT TTAAATTTGG
    GGCCCTTTCC TTTAAGGAAA TTTCCCCCAA CCTTTCCTTA AAAGTTTGGA
    AAAAAAAAAA AGGAAAACTT TCCTTTGGGA GGAGCCAAAT TTTTAAAAAA
    CACCAAAACC TTTTTGCAAA TTTTTAAAAA AAAATTTTTT CCAAAAGGTT
    TTCCAATTTT TTTCCAAATT TCTAAAAATT TCCCAACCAA AAAAAAATTT
    TTAAATTTAT TCCTAAAAGG TGTTTTTTGG GAAAAAATTT TGCCCCTGCT
    TTTAGGGAAA ACCTTTTTGG ATCCGCCCCC CCCCCAATTT GGAAATTGGT
    AAAATTTTTT AATAAAAAAG GGAACTTTTT TCCCCCG
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 888866 [Map]; Strand: c
      • AT2G03030.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain family protein
        Distance: -898; Region: promoter
    Flanking Genome Sequence: GT17159 - 5-prime edge
    GCCTCTTAGA CCAATACTCC TTTTTCTGCC TCCCCTCTTG TATTAGTCCT 
    AAACAAAACC TTCTTAAATT TAAGACAAGT GTAGGGTCGT GCATACAGAA
    AATAACGTTT TTCACTTTAT TTAGTTGGTA TATGACCAAT CTTAGGTTTG
    TTGCGTGGTA AACCAGTAAT GGTTTTCTAC AAATTTATTT GGGTTAATTT
    GTTCATCCTC ACTCGA

AT2G03030.1

Model type
Protein coding
Short Description
Toll-Interleukin-Resistance (TIR) domain family protein
Computational Description
Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT2G03300.1); Has 1604 Blast hits to 1539 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 1599; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03300.1

Model type
Protein coding
Short Description
Toll-Interleukin-Resistance (TIR) domain family protein
Computational Description
Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT2G03030.1); Has 1602 Blast hits to 1537 proteins in 50 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 1599; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03310.1

Model type
Protein coding
Computational Description
unknown protein; Has 17 Blast hits to 17 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR