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GT17138

CSHL Arabidopsis genetrap mutant lines

Original: GT17138

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17138

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1143664 [Map]; Strand: w
      • AT4G02600.2 - [+] show detail - Seven transmembrane MLO family protein
        Distance: -298; Region: promoter
      • AT4G02600.1 - [+] show detail - Seven transmembrane MLO family protein
        Distance: -335; Region: promoter
    Flanking Genome Sequence: GT17138 - 5-prime edge
    CCTACTTTCT CCCTTGTAGT ATCACTTAAT TATATACAAC GAAACATGTG 
    AACTGGAACA TAGTTGATAG AAAGGAAAAA GAGGGAAAAT GTGATTTGAT
    TATAGATTTA ACTCATTAAG AATGTGTGAT TGTGTGTGGA TGCTTTAAGT
    AAACACGGAA TAGAAACGAA TAATATGGAA ACTGGAAAGT TGAAAACGCG
    TTTCCTAATT TGTCTCACAG ATTTTTAATA CTAAAAAAAA GTGGAATATA
    TAAACTCTAT AATAAGGTCG TAATCAAATT ACATGAAGAT AATAGAGATC
    ATTTACCATA ATTAATCTAA TCAAAAGCAA TTAGTATTAT TGACAATGAC
    AACAAATCAT CAACACAAAG AGGAAAATAA ATAAATAAAA AAACTCAGAA
    GAATCTGTCT CACTGATTTC TT

AT4G02600.1

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).
Computational Description
MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 552 Blast hits to 532 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 548; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G02600.2

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).
Computational Description
MLO1; FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G44110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR