1. Home
  2. Mutant Lines
  3. GT17059

GT17059

CSHL Arabidopsis genetrap mutant lines

Original: GT17059

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17059

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1391459 [Map]; Strand: c
      • AT4G03130.1 - [+] show detail - BRCT domain-containing DNA repair protein
        Distance: -813; Region: promoter
      • AT4G03140.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -662; Region: promoter
    Flanking Genome Sequence: GT17059 - 3-prime edge
    TCACTTGTTC TAAGAACACA TTTCATTACT TTGGATTTTG AAATTCTAAG 
    TTGAAAATCT TTGTTTTATT TTCTTGGCTA GATTTGATGC GTGTCATAAT
    CTAATCCAAT TTGAAAATAT GTAATATGTT GTATAAAAAG TTAATATGCC
    AACAAAAGGA TAGATCTTAG TTGGTGGAAT CAACACCATT AGATATCAAA
    TTGGTCGTAT GCAATGTTTC TGTATAATAT ATCATTTGTC TACTGAATAA
    TATATATCAT AATGTTAATT GTTAGCTTTC TGTCGGGTTA TGAAGATGGT
    ATTGGTAGGT ACGTTGTATA ACATAAGAAT TGAAAACGTA AATATTATTC
    ATTAGTAGAC AGCTCATAAT AAGCACACCC ACACATGCAT GCCACAAGCA
    ATAGAGGTTT TTTAAAAGGT TTTCTTCTTT TAACAAAAGA AAGGCCTTTC
    TTTGATTTCA AATTTTCAAT GATATTAATA TTGCAATAAA ATACCATGAT
    ATAACATATT TTAGATTTAT ATTAATGATT TATGACCCCA AAAGACAAAA
    TATATTAATT AAAATATGGA GTTCAACAAT AACCTCAGCC TATTTGGCTA
    TTATACAATC TTGTTTTGGG AAGAAATCAA CACATGCTTA TGAACTTTTA
    TG

AT4G03130.1

Model type
Protein coding
Short Description
BRCT domain-containing DNA repair protein
Computational Description
BRCT domain-containing DNA repair protein; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT3G21480.1); Has 343 Blast hits to 316 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 46; Plants - 105; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03140.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 115095 Blast hits to 114901 proteins in 3526 species: Archae - 967; Bacteria - 76065; Metazoa - 4961; Fungi - 5951; Plants - 2443; Viruses - 5; Other Eukaryotes - 24703 (source: NCBI BLink).
Link
InterPro Scan - TAIR