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GT16821

CSHL Arabidopsis genetrap mutant lines

Original: GT16821

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16821

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2569078 [Map]; Strand: c
      • AT4G05010.1 - [+] show detail - F-box family protein
        Distance: 916; Region: intergenic
      • AT4G05018.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -2335; Region: intergenic
    Flanking Genome Sequence: GT16821 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATTTAA 
    TACATTGCTC TCCACATGTG GTTGTAGAAA GTAAAGAAGA GAAAAGAGAG 
    GCAAATTCTA TAAATTAGCT AAAAAGTAGC TTCACTTCAC GAAAGTACTC 
    TCTTATATAT ATTACAAACC TCACCGACAG CTATTTTTTG TTATCTGGAA 
    AGTTGTAAAT AATCGACCCC ATGATCCATT CTTTTTTTCA TGTTAAAGAA 
    ATGCAACTAA AGGGGCTTTA AACCCGAACT ACGTGGATCG AACCTAAACC 
    ATACAATCTT GTAAATTTAA AGTTTTGATC ATTTCGTGTG GAGGTTCAAA 
    CAAACTGATG ACACATGGTC GGTCGAAAAT AGTTCTAACG TCTCATGTGG 
    TTTTTACATT TTTGTGGCAT CTTTATCTTA TACATCCAAA TTCCAATGTT 
    GGTCACCGAT CATCTGCATT TGTCTTTACG TCTTATGACC CAAAAATGGT 
    CAATCATAGA AACATAGTCA ACCAACTCCT TGCCGTTGAG CAACTCAAAC 
    TCATCTTTTT CGTGCCGGCG AAAACTTCGG TTATGAAATT ATTTTCAACG 
    TCACCTTATC TTTTTACCGT GTCCAATTTA TTTTCCATTG ATTTGTTTAT 
    GGAAGATCAT TTGACTAG

AT4G05010.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G21510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G05018.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR