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GT16594

CSHL Arabidopsis genetrap mutant lines

Original: GT16594

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT16594

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16458419 [Map]; Strand: w
      • AT4G34420.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16594 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATTAG 
    AAGAGTCCTT GATCTGTTCT TTGAGTAAAT ACACTCCCTG GATCGATTAC 
    AAAATTTTAA ACTGTCTGTT ATTCCTGCTT GGCTAAATTC ATCTTTCAAT 
    TGTTTACTCC AACTATGCAG GTACCCGTAT GGTACACCTC TGATCAAACA 
    TTTATGGCTT CTCCTCCCCC TCGACTAAAG NTNNNNAAAT TACGGATCTC 
    GATTTATTAT TGACATTTAA AATGCGCCAT TGGAATTTAA ATGTTGTTGG 
    TGATGTACAG AGAAGAAACA GAATTGCAGA AAAATAGTAA CTAATCAAAG 
    CGTAAACATC GAGACGAACA GGTCGAGCTT AAACGATGTC GTTTTTGCTG 
    ACATGCACCA TTCAT

AT4G34420.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G15730.1); Has 209 Blast hits to 205 proteins in 19 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR