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Mutant Lines
GT16378

GT16378

CSHL Arabidopsis genetrap mutant lines

Original: GT16378

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16378

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 517654 [Map]; Strand: c
- AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
  Distance: 8229; Region: intergenic
- AT2G02080.1 - [+] show detail - indeterminate(ID)-domain 4
  Distance: 505; Region: intergenic

GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAATCAC 
AATGATCTGC TGTACCTTCG ATTTTGGGAG TGTTTCTATC CCATCAACAT 
CGGTATATGA GAACATGGAC TTCATCTCAC TCGACGAACC GAAGCATGAC 
GGTTCAGAAC AAGAGACAGA GACATTCCTT TGGATTTTAT AGTATTTGAA 
TATTTACAAA CGATAAAATA TTCCAGGTAG TTATTGGAAC AACTAGACAT 
GTTAAAATAT GCTTTAAGTG AACCAAAACA TGGATTTAAC CTCACATCAT 
GTTGAAACAT CCCGTTGAGA GGGTTGTTTT TCAAAACACA GCATAAATTG 
CCTATGGTCA GATTTGTGTG TATTCTTCCT AAACTGAGAT GTGTAATCCC 
AAGTTTCTAC TATTTTTAAA CCATTCAACC CCATTTTTCC GTTCATCTCA 
CTCGAC

AT2G02070.1

Model type: Protein coding
Short Description: indeterminate(ID)-domain 5
Computational Description: indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02080.1

Model type: Protein coding
Short Description: indeterminate(ID)-domain 4
Computational Description: indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 51298 Blast hits to 20221 proteins in 333 species: Archae - 2; Bacteria - 165; Metazoa - 48118; Fungi - 358; Plants - 855; Viruses - 7; Other Eukaryotes - 1793 (source: NCBI BLink).
Link: InterPro Scan - TAIR