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GT16117

CSHL Arabidopsis genetrap mutant lines

Original: GT16117

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16117

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17591793 [Map]; Strand: c
      • AT4G37409.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
      • AT4G37410.1 - [+] show detail - cytochrome P450, family 81, subfamily F, polypeptide 4
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16117 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAAGAATGA CACAGCAACA 
    TCATTACTAT ACAAGACCTT AGGCTACAAA GGTATCCAAG GATTTTTAAA 
    AATATAAAAT TATATTTACT AGTTATATAA AGATTTTTAT AAAAGTTGAA 
    GTTCTAATTG GTTTATTGCT TCTTTTTTTT ATGCACTCGA TTTTAGGTCT 
    GGTTTATTTG GGTTGAAAAG ATAAATTATT TCCACTATTA TATTTCAAAT 
    TTCAGATACA TTTTTTTTAG TATAGTTTTA ATTCATTTTG GAACAGTTAA 
    ACAAATCTAT GATAGTTAAT GACATTTCTT TTTCTTAGTT AATGAAATTT 
    GTATGTGTAT ATGTGAGATT AGCATGAATC ACGTTTTTAA ATCCCCTGTT 
    TTTTCTCTTA TAATATATGA AACAGGGCAT AATGGTTGCC TCATCAAAGA 
    CCTCCGCTTT GACAATAGAG TGGGCGATGG CGAGTTTGTT GAACCACCCA 
    AAAGTTTTGG AAAAAGTAAA ATTAGAGATT GA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17591729 [Map]; Strand: c
      • AT4G37409.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
      • AT4G37410.1 - [+] show detail - cytochrome P450, family 81, subfamily F, polypeptide 4
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16117 - 5-prime edge 
    TTCATCCACT TTCTCCCTGG TCTTCTATTG AAGGACGTTG TTTTAAAAAT 
    ATCTATGAAT GGGTTTTGAT TCGTTACCAG CATTAGGCCT TTGATAATGA 
    TGTCAGTGTA GTACTCAGGA TCGTCCTGTT GCAAAGAGAG CAAGTGATTA 
    ACCATAGTGT TACCGTCTTT ATCACTCTTG CACTCGTCAA GCAGACGCTG 
    CAACATCTCA TCGATGACTT TAGCTGCAGC TTTCACCTCC TTCTCAAAGC 
    TCCCTCCGAA TATCTTCATG AAGGGCAAGT ATTCTCCAGG ATGCCTCGCG 
    CCACTATTAG TGGTGATGAA AGTAAAAAGC TTCTTGAACA ACTCTG

AT4G37409.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37410.1

Model type
Protein coding
Short Description
cytochrome P450, family 81, subfamily F, polypeptide 4
Curator Summary
member of CYP81F
Computational Description
"cytochrome P450, family 81, subfamily F, polypeptide 4" (CYP81F4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 3 (TAIR:AT4G37400.1); Has 35936 Blast hits to 35767 proteins in 1827 species: Archae - 66; Bacteria - 5738; Metazoa - 11729; Fungi - 7404; Plants - 9478; Viruses - 6; Other Eukaryotes - 1515 (source: NCBI BLink).
Link
InterPro Scan - TAIR