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GT16108

CSHL Arabidopsis genetrap mutant lines

Original: GT16108

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT16108

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1935720 [Map]; Strand: c
      • AT1G06350.1 - [+] show detail - Fatty acid desaturase family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT16108 - 5-prime edge 
    CTTTCTCCCT GATAAGACCT ATATATATAT ATTCAAATTA GTCTTAGGAA 
    AAAGGGATTT GACGATCTTG TGAACATATT CAGGTGGTTA AGTTTGTTTA 
    CGATGGGAGA AAGTTGGCAC AACAACCATC ACGCGTTTGA GTCATCGGCG 
    AGGCAAGGAT TGGAGTGGTG GCAGATAGAC ATAACTTGGT ACCTCATTCG 
    ACTATTTGAG GTTCTCGGTA TAGCCACTGA TGTGAAATTG CCCTCGGAAC 
    TCCAGAAACA AAAGATGGCT CTCGTTCGTT AATGTTTATT CTGAAATCTG 
    TATTATTATT CGTTAATTAA GAAGCTATTT ATGCACTTCT TACCAACAAC 
    ACAAAAAAGA AGAAGCTATT TATGCACTAA ATAAATGAGA CACTACAGTT 
    GTTTTTCATT TTCTTTTCGG ATTCGAAATT ATGATTGTTT CCCATTATAA 
    GTATATGTTT TTCTCTGGCT TATGTCTTCT AATTTTTTCT TCATTAATGC 
    TAATTATATA TTAGTCACGT GA

AT1G06350.1

Model type
Protein coding
Short Description
Fatty acid desaturase family protein
Computational Description
Fatty acid desaturase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; INVOLVED IN: oxidation reduction, lipid metabolic process; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: Fatty acid desaturase family protein (TAIR:AT1G06360.1); Has 3426 Blast hits to 3426 proteins in 822 species: Archae - 0; Bacteria - 1532; Metazoa - 799; Fungi - 234; Plants - 106; Viruses - 4; Other Eukaryotes - 751 (source: NCBI BLink).
Link
InterPro Scan - TAIR