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GT16092

CSHL Arabidopsis genetrap mutant lines

Original: GT16092

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT16092

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24076450 [Map]; Strand: w
      • AT5G59760.1 - [+] show detail - Protein of unknown function (DUF1635)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16092 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCTTAGT 
    CTTACAACAG AGTATAACAA AACACAGACA CTGATCAATG GATGTCTTAT 
    ATTCTTCTAA TTGGCTTCAT CAAGAGGTAT CATCATCATC ATCATCATCA 
    TCATCATCAT CATCATCATC ATTACTTTTC TTTAATATAT ATACTCATAT 
    GAAACTCTTT TTGAAATGCA GAGCATTGAT GAGATGAGGC AGAATCTACA 
    GAGCACTCTG TTCGAACTAG AGACACTGAA AATGGAAGCT AATGAGAAAT 
    CAAGAACACA CAGAGAAGAA GTGAACCAAC TTCTCAATCT CCTCAAATTC 
    ACTCAGCAAG AAAGAGACGA AGCTAGACAA CAGTTATCTC AATTCATCTT 
    CCCATACCCA ACAAAACCCT AATTCAAGAA GCCTCACTAA ATCAAACAGC 
    TTCTCTCACT CTCAAGATGT ATCT

AT5G59760.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1635)
Computational Description
Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT2G28690.1); Has 104 Blast hits to 104 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR