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GT16072

CSHL Arabidopsis genetrap mutant lines

Original: GT16072

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16072

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 506359 [Map]; Strand: w
      • AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16072 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAACCGA 
    GAGAAGAGTG TACCACAGTC ACAACGATAC TCTTTGGTAC CACAAGTCTT 
    GGAGTGAGCT TTCCAATCCG ATTGAACAGC GTAACGCTTA GAGCATTTAT 
    CGCATTTCCA CTTCA

AT2G02070.1

Model type
Protein coding
Short Description
indeterminate(ID)-domain 5
Computational Description
indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink).
Link
InterPro Scan - TAIR