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GT16059

CSHL Arabidopsis genetrap mutant lines

Original: GT16059

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT16059

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16786637 [Map]; Strand: w
      • AT3G45720.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT16059 - 5-prime edge 
    CTTTCTCCCT GCCTATGTCA GTGTTATGGC TGTTACCACC TCTTGTGATA 
    GTTGGAATTG GCGATGCCTT TCATTATATG GCGAATGTTG CAGTGTTCTA 
    TGGAGAGTTC CCTGAGTCTA TGAGGAACAC AGCAACCTCT GTGACCTCGG 
    TGGCGTTTGG AATCTCCTTC TATTTAAGTA CAGCTCTAAT AAACTTGATA 
    CAGAGGACCA CCGCGTGGTT ACCAGACGAC ATTAACCACG GGAGAGTGGA 
    CAATGTGTAC TGGGTTTTGG TCATTGGAGG TGTCTTGAAC CTTGGCTATT 
    TCTTTGTCTG CTCTTGGTAT TTCACGTACA GAAAAATCCA AGATGATAAC 
    AGACAAGATC CTAAAGATGT TACAAACTAA GACACAACAT GTTTTGTT

AT3G45720.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45680.1); Has 4336 Blast hits to 4242 proteins in 649 species: Archae - 2; Bacteria - 1337; Metazoa - 453; Fungi - 208; Plants - 2079; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).
Link
InterPro Scan - TAIR