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Mutant Lines
GT16056

GT16056

CSHL Arabidopsis genetrap mutant lines

Original: GT16056

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16056

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 526553 [Map]; Strand: w
- AT2G02090.1 - [+] show detail - SNF2 domain-containing protein / helicase domain-containing protein
  Distance: 0; Region: exon11 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGTCCGTTTT CATCCCTAAT 
GGCAACGATC TTCATCTCAC TCGACAATCT GTGGATTAAA ATCCATATCG 
TGAATAATGA CTGTATCCGC CCCGGTTAAA TTAAGACCTT GTCCACCTGC 
TCGAGTTGAC AAGAGACATG CGAATATCGA CTTATCGTTG TTGAATGTGT 
CGACTATGGT TTGTCTATCT GTAACTTGAG TACTGTTGAA ACAAAAGAAA 
ATGACTTAAG CTTCTTCCTT TTTGTAGAAT CGTCAAAAAT GTGACAAATT 
ACTCTTTTTT CTTTTATTAC CTGCCGTCAA GTCTTCGGTA TGTAACGCCG 
ATGACATCAA GTGTCCATTC TAAGATATCG AGCATCGATG TCCATTGACT 
AAATATTAGA ACACGATGGC CGGATTTCTT CATTGAAGGG AGAAGCTCAG 
CTAATGTCTG ATACATAAAG GGAGATTTAG ATCGCTCACA GGTTTAGTTA 
TACTTAATCA GTTTCACAAA GAAGACTTAT GAAATGAAGA AGAATATCAC 
GTACCCGACA TTTTGCTGAG AGCATGAATT GTTTGTCTGA GAGAGTTCCT 
TTGGTATCGT TAACTCCATA TTGGAACAAA AGCTATGGAA AGAAACAAGT 
TAGTTAGCTT CTTCAATTGC ATAACATGTT TGTTAATGGA TATTCAACTG 
CTTTTTGGAA AGAGAAACAT TTTACCCGAC CGGATCGTAT CGG

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT16056 - 5-prime edge
```
GAGGAGAACA TGCCGACAGC GAGAGCGCGA GCGCCATGAA TGCAA
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 526666 [Map]; Strand: w
- AT2G02090.1 - [+] show detail - SNF2 domain-containing protein / helicase domain-containing protein
  Distance: 0; Region: intron11 (CDS)

CTTTCTCCCT GGTTGCATCG TATTGGTCAA ACAAAACCAG TCACTATCTT 
CAGGTTTGAG CTTTAAATCC TTGGCCCAGT GAAAACGTTT TAGAGATAGC 
ATATTAACTC TGGCAATGTT GGTGCAGACT GGTGACGAAA TCGACGGTTG 
ATGAGAACAT CTACGAGATA GCGAAGCGGA AACTAGTTCT TGATGCGGCG 
GTTCTAGAGT CCGGAGTTCA CGTAGATGAC AACGGAGACA CGCCTGAGAA 
AACCATGGGA GAGATTCTTG CTTCTCTTCT CATGGGATAA CATTATTGTT 
ACCTTTTTTG TTTTGAGGTA AAATTAGTCA AGAAACGAAG TTAATGTGTT 
ATTCTAAACA TGTGTAACCA CTAGCTATTA TTAGACTTAA ATTTAATAGA 
TCACGATAGT TATATTTTCT TCTACGCATG TAAATTATAA CCCAAAAATT 
TCCTTCTTTA GACCTAAAAG TCACAATTGT TCCAAACACT AAAATGTGGA 
TCAGTGATCA AATGAAGTGA ACCTTCAGGA TAGTTTAGTC TTCGATCATC 
AAAGATTGTA TAAAGGAGTG ACTTAGCTTT ATGTGTAGGT ATCAAAATTG 
AAAACCTCAC GCAATGATTA AAGGTCTCAA GTATCTTTAT TCGTCAGAGT 
TGTATAAGAC ACAAATCTCA CTAGATTGTT TTCCCATTGT CTTTGCCGAA 
ACCTAACAAT GAACAACTAG TTCTATTAGG ATTGGTTCAA GAATGTCACA 
TAGTATAAGT TTTTCTTAGC TGAAAATTCT AGATAACTTG GAATAAATCT 
AG

AT2G02090.1

Model type: Protein coding
Short Description: SNF2 domain-containing protein / helicase domain-containing protein
Computational Description: ETL1; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 5 (TAIR:AT2G13370.1); Has 19948 Blast hits to 16374 proteins in 2059 species: Archae - 127; Bacteria - 6550; Metazoa - 3755; Fungi - 4012; Plants - 1782; Viruses - 219; Other Eukaryotes - 3503 (source: NCBI BLink).
Link: InterPro Scan - TAIR