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GT15944

CSHL Arabidopsis genetrap mutant lines

Original: GT15944

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15944

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1020222 [Map]; Strand: c
      • AT2G03350.1 - [+] show detail - Protein of unknown function, DUF538
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15944 - 3-prime edge 
    GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTATTT GTTACCTTTA 
    AGCTTGTTGA AAATCCATTT TGCTTTCTCT TCAACCGTAC TGGAGAATGT 
    CTGGAAGAGA AAAATGAACA TCATATAACC ATTTGAGGCA ATGCAAATCA 
    ACCAAATATC GAATAACTAG CCTACGAACA CACGGATACT TAGTTAAGAA 
    GATAAATCGA ATGATACGTT CGAAAAATGG TCTTAGAATA GATATCTTGG 
    CACAACTATA GCAAACTCAA GAACACAAAT CCAGTGAAAC TGGTTTTCTA 
    GGCTTATCTT AGTAGAGCTC TTAGCCCAAA AAGCAGAACA TGAACAGATT 
    AATACCAAAA AGGATTCATC TTTTCTAGTA AACAATGCCT TAAAATGGAA 
    ACTTTAAATT GAGAAACAAG CTAAGTTGAG TTAACTAGTA TAAAGAGTCT 
    CTAATGCTAA AAATCTCAAC TTGGTAAAAT TGGAACTTGT TTATACATCA 
    AATTGCTAAA TTGGTCTGAG ATAAGGACTA TGTATCAACA ATTCTAATGA 
    TGTTAACTAA TTTT

AT2G03350.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF538
Computational Description
Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G08890.2); Has 544 Blast hits to 544 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 543; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR