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GT15943

CSHL Arabidopsis genetrap mutant lines

Original: GT15943

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15943

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14544566 [Map]; Strand: w
      • AT2G34510.1 - [+] show detail - Protein of unknown function, DUF642
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15943 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACCTGGA TGGACCGTCG 
    AATCGAACCG AGCAGTACGG TTTATTGACT CAGACCATTT CTCGGTCCCC 
    GAGGGGAAGC GAGCTTTGGA ACTTTTATCG GGCAAAGAAG GCATAATTTC 
    TCAAATGGTT GAGACAAAGG CGAACATTCC GTACAAGATG TCTTTCTCTT 
    TGGGACACGC AGGGGACAAG TGTAAGGAAC CTTTGGCTGT AATGGCTTTT 
    GCTGGAGATC AAGCACAGAA CTTTCATTAT ATGGCGCAAG CAAACTCGAG 
    TTTCGAAAGA TCGGAGTTGA ACTTCACTGC GAAAGCTGAA CGTACGAGGA 
    TCGCCTTCTA CAGCATTTAT TACAATACGA GGACGGACGA TATGACTTCA 
    TTGTGTGGAC CTGTGATTGA TGACGTTAAG GTTTGGTTCT CCGGGTCTAG 
    TAGAATTGGA TTTAGTTTTC CGCTTTTTAT TCTTCTTTCT TTGGTTTTCA 
    TCTAGATTGT TCCGGTTCAG AAATTGTATT GGTAGACCGG GAATTAAGAC 
    GGGATTCCAC GTTGTATGAT GTATCGTTGT ATGATGGATC GGTTCAAGGT 
    ACAAGAAATG ACAAAGTACT TATGCAATTC ATGAGTTTAG AGCAATCATG 
    CTTAAACAAT TATCAAACTA GCTAGGCTAT ACATTTTTGT AGCTTTATTG 
    CAAATTAATG TAAACTAGTT CTTGGAACCT AGTCAGATTC GTGCAGCTTT 
    TATTTAACAG TTTGAGATAG CTTTCAGTGA TATCAATGTC TAAGATTAGT 
    TTCCATTTAT GTGGATTGGT CTCTTAGGAA ACGAAGAGAA CATTTTCAAG 
    GTAATCTTAA AAATTAAACA CTAAAACCAT AAACGTGTAG TAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14544664 [Map]; Strand: w
      • AT2G34510.1 - [+] show detail - Protein of unknown function, DUF642
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15943 - 5-prime edge 
    ATATTTCTCC ATCGAGGTTT GTTGGAAGCA GAACACCTAA GGTAGTGTTC 
    CTAAACATCC ATGGTACCTT CTTACAAAAT CTCCATTAAT CACTGCATTG 
    CCTGTAAAAA GTACAAAATT TTACTTTTAA CTTTACTCTA AATCTCTTCT 
    ATTGGACGAT TTATAAAACT TTGGTATCGA AAACCTAAAT ATAACGTTAC 
    CTTTGGGTT

AT2G34510.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF642
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT1G29980.1); Has 305 Blast hits to 265 proteins in 22 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR