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GT15927

CSHL Arabidopsis genetrap mutant lines

Original: GT15927

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15927

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12169070 [Map]; Strand: c
      • AT1G33560.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15927 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACTTACACTC CAAGATCGGT CTCGATGGCT TCGTTCATAG ATCTTTTCGC 
    CGGCGACATC ACGACGCAAC TCTTAAAGCT GCTCGCTCTA GTAGCTAACA 
    CAGTCTACAG TTGCAAAGGA ATCGCCGAAC GACTGATCAC GATGATCAGA 
    GACGTTCAAC CAACGATCAG GGAGATCCAA TACAGTGGCG CGGAGCTGAG 
    TAACCATCAC CAAACTCAAC TGGGAGTATT CTATGAGATC TTGGAGAAAG 
    CAAGAAAGCT ATGTGAAAAG GTTTTAAGAT GCAATAGGTG GAACCTTAAA 
    CATGTGTACC ACGCGAATAA GATGAAGGAT CTCGAGAAAA AAATATCTCG 
    TTTCCTCAAC AGCCAGATTT TGCTCTTTGT TCTTGCTGAG GTATGTCATC 
    TACGGGTCAA TGGTGACAGG ATTGAGAGGA ATATGGATAG ACTGTTGACT 
    GAGCGGAATG ATTCTTTGTC GTTTCCGGAG ACTATGATGG AGATTGAGAC 
    GGTAAGCGAT CCGGAGATTC AGACGGTATT GGAATTGGGG AAGAAAAAGG 
    TGAAGGAGAT GATGTTTAAG TTTACGGATA CACATTTGTT TGGGATCTCT 
    GGAATGAGCG GTTCAGGGAA AACCACTCTT GCAATAGAGC TTTCAAAAGA 
    CGATGATGTT CGAGGTTTGT GAAGTTTTAT TGAATTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12169026 [Map]; Strand: c
      • AT1G33560.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15927 - 5-prime edge 
    TTCCATCCTA CTTTCTCCCT GAGTGTAAGA CAGAAAAAAG AAAGTGAGAT 
    GGTTGAGTGG TAATAAGGGT TGATACGTTT TTAGATTAGA AAATAGCGAA 
    GAAGACGAAG TTTCTTAGCA ACTTCCAATA ACATACGTTT TGTCGTTTAG 
    TGTTTTAAAG TTTTGTTTCT GCGGTAACAC ATGTAATAGC TTTGTAATAG 
    ATTTCAGAGA ATGTATGGAT CTTATGGTTA CGTATCAGTT TTTCACTTAT 
    TATCAAACAG ATCGATTTAG TAGTTTTTTT TCGAATTCGA TTATCTAGAC 
    AAACTCTAAA TTACGATATT CCCTAATACG GCCATACGGG TTCAATCACT 
    TTGGGAGTGT AATTGTTTAA AGTTAGCTAA ATCCTATTTG GATTAATACC 
    TCTAATCTTG TTTTTTTTGG TCGCTATCTC TATCTAATTT AACTAATTGG 
    GAAAGAAAAA CGATCCCATA TGCAACCTTG TTTATAATTT TTTTTCTCTT 
    GTGATTATTT GGTGTTGATA TGTGTATAAA CTATATAGGG ATTAGGGACT 
    CGAACTTTTT CAATGTTTAT TTTGTAGCTT TTTTTTTTTT TTTTCCCTTG 
    CGCCCCTTTT TGGAAAAAAA AAAAAAAAAA

AT1G33560.1

Model type
Protein coding
Short Description
Disease resistance protein (CC-NBS-LRR class) family
Curator Summary
Encodes a NBS-LRR disease resistance protein that possesses N-terminal kinase subdomains. Activation tagged mutant of ADR1 showed elevated levels of SA and reactive oxygen species in addition to number of defense gene transcripts. Exhibits resistance to number of microbial pathogens.
Computational Description
ACTIVATED DISEASE RESISTANCE 1 (ADR1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to water deprivation, response to karrikin, response to other organism, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 17381 Blast hits to 12089 proteins in 491 species: Archae - 20; Bacteria - 813; Metazoa - 875; Fungi - 81; Plants - 15224; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink).
Link
InterPro Scan - TAIR