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GT15921

CSHL Arabidopsis genetrap mutant lines

Original: GT15921

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15921

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12158802 [Map]; Strand: w
      • AT4G23230.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 15
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT15921 - 3-prime edge 
    CTAGTCACAC AGAGTTCAAA AACGAGGTTG TTGTAGTTGC AAAGCTTCAG 
    CACAAAAATC TAGTTAGGCT TCTCGGGTTT TCCCTTGAAG GAGAAGAAAG 
    GTTACTGGTC TACGAGTATG TGGCCAACAA AAGCCTTGAT TACTTCCTCT 
    TCGGGCAGTT TCATTTATTG GTTTTTGTTT CAAATGAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12158884 [Map]; Strand: w
      • AT4G23230.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 15
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT15921 - 5-prime edge 
    CCTACTTTCT CCCTGTGTGT GACCTTGTCC TGATGATTCG GACAGTCTCT 
    TCACTGCAAC TTCAGTTCCA TTCGAAAATG TACCCTATTC GTTTTTATCA 
    GCATTATCTC ATTACCAAAA GTATTGACAT AAGATTTTCA TAAAAATTAC 
    ACAACCGTAG GCCCATTAAA AGTATTAATA GTAATAGTAA TAGTAATAGT 
    ACCTTGTAAA CCTCACCAAA TCCACCTTGA CCAATCTTAT TATTTTCTGA 
    AAACTTATTT GTTGCATCTC GAATCATTTT ATAGTTAAGT TGCAGCGACT 
    CTACGGTTGT TATGTCATCT CCTGTTGCAT AATAATAGTC AGAAAATAAT 
    AAAAGAGTAG TCAATTACAT AATCAAACCA ATTAATATTG TTTATCATTC 
    GAACTTTTAC CATCAAAGGT TGGTGCAGTA TCAAAAGTCT TCTTTGCCCT 
    TTTTGTAAGG AAACAATAAC CAGCTATCAA AAGCAGAACA ACCACTGTAA 
    TAGGTACAAC AATGGCTACC ACCAACACAT TTGAATTCCC ACCCTTTTCC 
    TGTTTTTCAA ACATCATTTT TTTAAGA

AT4G23230.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 15
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 15 (CRK15); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 121584 Blast hits to 120147 proteins in 4447 species: Archae - 110; Bacteria - 13930; Metazoa - 44451; Fungi - 10585; Plants - 34122; Viruses - 456; Other Eukaryotes - 17930 (source: NCBI BLink).
Link
InterPro Scan - TAIR