1. Home
  2. Mutant Lines
  3. GT15846

GT15846

CSHL Arabidopsis genetrap mutant lines

Original: GT15846

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15846

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26581037 [Map]; Strand: c
      • AT5G66600.4 - [+] show detail - Protein of unknown function, DUF547
        Distance: -2211; Region: intergenic
      • AT5G66607.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 2394; Region: intergenic
    Flanking Genome Sequence: GT15846 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAATTCA 
    GTATATGGTT TAACTTATAC AAGGAGTTCG AAATTATTCC AAAGGCAAAG 
    TGAAGATAGA TTGAAATTAC GATTAAAAAA AAAAAAAAAA AAAATATTTC 
    CCCCCCAGGG GGGAATTTTC CCTGGGGAGC CAGGAAAACA AGGCCCGGGA 
    AAAAAATTTG GCCGGTTTCC CAAAGGGCCC CCCCGGTTTT T

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26580976 [Map]; Strand: c
      • AT5G66600.4 - [+] show detail - Protein of unknown function, DUF547
        Distance: -2150; Region: intergenic
      • AT5G66607.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 2455; Region: intergenic
    Flanking Genome Sequence: GT15846 - 5-prime edge 
    CTTTCTCCCT GACTGAATTC GAATACGTTC ATATTTTGGA TTCGATCAAA 
    TGAGTATTTC TCCTCTCTTT TTTTTTTGCG AAACCTTTCC AAAATTGACA 
    AACGGAACGT ACCTGTTCCG CTTTTTAAGG GTTAAATTTT AAAAACTTGT 
    TTTTGGGCCC CCCGGGAAAG TTTAAAAATT TTGGTTTACC CAAACGTTTA 
    GTTAATTTGG GGGGCCGGGC CCGCCAAATT TTTAAAAACT TTTTTCAAAA 
    AAAATTCTTT AAATGGGGGG GGTTAGGGAT TTTATTTTTG GAGAAATGGC 
    CCCCGGGTTA TTTTCCAAAA ACCAACCTGG CCCCCCAATT TTCCCCCCAG 
    GGGGAATAAA TTTTTTTTAG GGGTCCCACC CTTTTTTTTT AAGATTTTAA 
    AAACCCGGTA AAAGGGGTTA AAAGAACCCG GGGGCGATTA AATGGGGCCC 
    CCCCGGCCAA GGGGGAAAAA AACCCGCCGG GCCGGGGTTC TTTTGGGTTT 
    TCCGATTTTA AACCCCCGGG GCCCGGGGTT TTCCCCATTT GAATTTAAAT 
    GGG

AT5G66600.4

Model type
Protein coding
Short Description
Protein of unknown function, DUF547
Computational Description
Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1).
Link
InterPro Scan - TAIR

AT5G66607.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR