1. Home
  2. Mutant Lines
  3. GT15795

GT15795

CSHL Arabidopsis genetrap mutant lines

Original: GT15795

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15795

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26752849 [Map]; Strand: c
      • AT5G67020.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 1600; Region: intergenic
      • AT5G67030.1 - [+] show detail - zeaxanthin epoxidase (ZEP) (ABA1)
        Distance: 661; Region: intergenic
    Flanking Genome Sequence: GT15795 - 5-prime edge 
    TTCCATCCTA CTTTCTCCCT GTTTATGATT ATTGTTGTTT ACAATTATTT 
    GCGTTGCTCT TTTTGGACTT CTCTCGTGAA GAAAATCAGA CGGTTGGGGA 
    AGGCACGTGA TGGGCGGTGG GATTCCCACG TGATCGGAGG AACAATATTA 
    ATGGCTTAGC AGCTAATATA TTATTATAGG ACGATTTCGT GAATATATAC 
    AAATGTGATA TCACAATTTG ATAGGGAAAA TACACTGTTC GTCTTAAACG 
    GTAGTCACTA GCTTAATGAA TAGTGAGACG ACGGGTCATG TATACAATAA 
    CACAAAAGTA GGACTAGTAT NTATTNAAAA GATACTGTAT CAATTATTGC 
    TTATAATAAT GTTTAATTAA TGTAACGAAC GACATTGCCT TTTTCTCTGA 
    TGTTCACGTA ACACATCCAA ATACATATTA TTTCGTAGTG ATATCCAACG 
    ATAGGCTGTC CGATTCAATT CA

AT5G67020.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67030.1

Model type
Protein coding
Short Description
zeaxanthin epoxidase (ZEP) (ABA1)
Curator Summary
Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.
Computational Description
ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6841 Blast hits to 6837 proteins in 1107 species: Archae - 14; Bacteria - 3761; Metazoa - 2; Fungi - 1599; Plants - 605; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR