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GT15766

CSHL Arabidopsis genetrap mutant lines

Original: GT15766

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15766

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22555854 [Map]; Strand: c
      • AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 1205; Region: intergenic
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -1748; Region: intergenic
    Flanking Genome Sequence: GT15766 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACATACC ACTGTATGTT 
    CAACTTCTCA TCTTCTCTAG CTTCATTCCA CACTATAAAG CTATTGGATA
    TGCAAAAGAT TCATGAGGGT TTCCAATTAA ACAATAACTC AAAATGAAGG
    TTTCGTTTTC TTCACTAGTC CCTTGAGTCA TCAAATTCTT CAATGCCCTG
    GAGAAGTCTG GGAATCTCTC TATGAGCCGG CATCAGTTTT TTCATTAGGC
    ATCTTAAAAC CCCCCAATTA TTTGCACCTG GTTTCCTCAA TATAAATCTT
    CATTGTCTAA ATCATTCACA TCTTTGTCTT CAACAAAGTC TGTAAAATCT
    TCTTCCATCT TCTTTCTCTG ATCCAGAATC ACTAAAGACA CTACTTCTGA
    AGCTTAGTGA AGGAGCTGCA GCCCTTGGTC CTTGGAGCAT CATCTACAAG
    TTCTAACCAT TACGATACCT ACAGAGTTAG GTTTGGATCA AACATTTAGG
    CTATCAAAGG TTGGTGAACT GCATCACTTC TCTGCATATT CATGCTTTTC
    AAGAAAAGCT ATTCAATACA TCATCACTGG CTAGTATGGA GAATCTTCAT
    CATCTCTATG TCGAAAGTAG TCATGTCTAG GAGATGTATA TATTGCAGGA
    AAGCTAAATG GACTAGTCTA ATTTAAACAA TCCGACAATT CCATGCTTTA
    CCAGTCGTCT CTC

AT1G61180.2

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR