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GT15724

CSHL Arabidopsis genetrap mutant lines

Original: GT15724

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15724

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 385724 [Map]; Strand: w
      • AT4G00900.1 - [+] show detail - ER-type Ca2+-ATPase 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15724 - 5-prime edge 
    TTGCTTCACC GGTTAACGAG CTTTGCTCGA CTCTTAAAGT GGATGTTTTC 
    AAACCGGAAA CTCTCATATC AGCAGGGACT TTATCTCCTA CATTTAACTC 
    CACTATATCC CCTGGAACAA GCTCTCTAGC AGGCAAATTA GGCAACACAT 
    TCCCATCTCT CAAAACCTTT GCAGATTCAC ATTGCATCTC TTTAAGAGCC 
    TCAAGAGCTT TCTCAGCATT ACTCTCTTGC CACACACCAA CCACAGCGTT 
    TAAAATCAAA ATCAAAACAA TCACAAAAGG CTCAACAAAG GCCTCGAACC 
    CTGAACCTGA GCCATGTTCC TCGCTTTCAC CTAAAAAGGC TAAAACGAAA 
    GAGATAAACG CAGCACCGAG AAGAATCTTC ACAAGCGTAT CGACGAATTG 
    TTCCAATACA AGATGCCATA AAGGCTTGCC TTTCTCCTTA GCAAGCTCGT 
    TAAAACCGAA CTTTTAACGG CGGATTTGGA CATCTT

AT4G00900.1

Model type
Protein coding
Short Description
ER-type Ca2+-ATPase 2
Curator Summary
Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.
Computational Description
ER-type Ca2+-ATPase 2 (ECA2); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: calcium ion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR