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GT15711

CSHL Arabidopsis genetrap mutant lines

Original: GT15711

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15711

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9998115 [Map]; Strand: w
      • AT3G27110.1 - [+] show detail - Peptidase family M48 family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G27110.2 - [+] show detail - Peptidase family M48 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15711 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAACTC ACTGAACGAC 
    GACCAGAGCT AAATCCCACT TTCTTCGGTA GTCTATATCC CAAACTACGA 
    GACAATTCGC CGCTCTGATT GTAACAGAGG GACAAAACCG GAGCTGAGAC 
    TGAAACCGCC ATGAGAGAAG AGAGGGGCGT AAGTTAAGAG TTGAGTGCTA 
    TTGTACGCCG GTGAAGAAGA GAAGATATAG AATGATATAA ATTTGGGTTC 
    TCTGCGGTTG CGTTTCGGAG ACGACAAGCG TGTGCCGTCC ACAACCGTAG 
    TTTAATG

AT3G27110.1

Model type
Protein coding
Short Description
Peptidase family M48 family protein
Computational Description
Peptidase family M48 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2654 Blast hits to 2654 proteins in 909 species: Archae - 247; Bacteria - 2042; Metazoa - 0; Fungi - 12; Plants - 34; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G27110.2

Model type
Protein coding
Short Description
Peptidase family M48 family protein
Computational Description
Peptidase family M48 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2654 Blast hits to 2654 proteins in 909 species: Archae - 247; Bacteria - 2042; Metazoa - 0; Fungi - 12; Plants - 34; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).
Link
InterPro Scan - TAIR