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GT15618

CSHL Arabidopsis genetrap mutant lines

Original: GT15618

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15618

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30354501 [Map]; Strand: c
      • AT1G80770.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -614; Region: promoter
      • AT1G80770.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -614; Region: promoter
    Flanking Genome Sequence: GT15618 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATC 
    CAATAAGCTT TTGAATCCCT GAGCACATCA TAACAAAAGC GTGGCCGTGC 
    GTGATCACAT GCAAACCTTA CCATCTGTCG AGAACATGAA ATATTTATAC 
    CGGGATGAAT TCTTCGCGTG CTTCGTCTCA CTCGAC

AT1G80770.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
pigment defective 318 (PDE318); FUNCTIONS IN: ferrous iron transmembrane transporter activity, GTP binding; INVOLVED IN: ferrous iron transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), Ferrous iron transport protein B, N-terminal (InterPro:IPR011619); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 11067 Blast hits to 11052 proteins in 2859 species: Archae - 320; Bacteria - 7505; Metazoa - 379; Fungi - 348; Plants - 242; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80770.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
pigment defective 318 (PDE318); FUNCTIONS IN: GTP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1).
Link
InterPro Scan - TAIR