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GT15504

CSHL Arabidopsis genetrap mutant lines

Original: GT15504

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15504

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1020197 [Map]; Strand: c
      • AT2G03350.1 - [+] show detail - Protein of unknown function, DUF538
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15504 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATAAGCC ATGAGATAAA 
    CAAAAAATGG TGTTTGTTAC CTTTAAGCTT GTTGAAAATC CATTTTGCTT 
    TCTCTTCAAC CGTACTGGAG AATGTCTGGA AGAGAAAAAT GAACATCATA 
    TAACCATTTG AGGCAATGCA AATCAACCAA ATATCGAATA ACTAGCCTAC 
    GAACACACTG ATACTTAGTT AAGAAGATAA ATCGAATGAT ACGTTCGAAA 
    AATGGTCTTA GAATAGATAT CTTGGCACAA CTATAGCAAA CTCAAGAACA 
    CAAATCCAGT GAAACTGGTT TTCTAGGCTT ATCTTAGTAG AGCTCTTAGC 
    CCAAAAAGCA GAACATGAAC AGATTAATAC CAAAAAGGAT TCATCTTTTC 
    TAGTAAACAA TGCCTTAAAA TGGAAACTTT AAATTGAGAA ACAAGCTAAG 
    TTGAGTTAAC TAGTATAAAG AGACTCTAAT GCTAAAAATC TCAACTTGGT 
    AAAATTGGAA CTTGTTTATA CATCAAATTG CTAAATTGGT CTGAGATAAG 
    GACTATGTAT CAACAATTCT AATGATGTTA ACTAATTTTC ATCTTCAATT 
    GGTAAAACCC ATCTCAGATC TTCATAGATC TGTGATTCTT CTACGATTTC 
    GAAACATACA AGTACAAGAT TTCACAAAAG AATCGCCCTT TTAATCAACA 
    CCTTTACACC AAAACGTAAC AAAAAGCC

AT2G03350.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF538
Computational Description
Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G08890.2); Has 544 Blast hits to 544 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 543; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR