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GT15455

CSHL Arabidopsis genetrap mutant lines

Original: GT15455

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15455

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6532037 [Map]; Strand: w
      • AT3G18940.1 - [+] show detail - clast3-related
        Distance: -2888; Region: intergenic
      • AT3G18950.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -4678; Region: intergenic
    Flanking Genome Sequence: GT15455 - 3-prime edge
    CGTTACCGAC CGTTTTCATC CCCCACCAGT TATCAAAATC TTAGTTGCCT 
    GTGCGTATAT TTCTAGCTAG TTTTCTACAA ATATAGATGA AAAATAATTA
    ATACTAACAG CGATGTGCCG ATGTGTACTA TAATGTTCAA TGTATCTTTA
    CGATATATGA GTTATTTATT GACATGGCAG GTTTCGAAAT GTAGAAAACG
    TCCACGCTGA CTTTTGCAGA AGTGATCCAT TTGTTTCGTA CTCGTACATA
    TACGATAACA AATACTATCC TATCATGCAC TAAAAAGGTT TAGTTCTTTG
    GTTCCTAATG CCAATTAAGT ANTTAATTTT AAGACTCTAT TATATACTAT
    AGTCTATGGA TGATGACTTA TTGCAGCCGT AATTGTATAT TCTGGTTATA
    AGTTCGTAAA CTTTAGATTA TACACAATTA ATCCATATTC CATAATGTTA
    TTGAATTTTG GTTTAGCATA AACCGTGCCT CAACAAGTAG GATGAGATTA
    TATGCGCATG GTTATCGGAA TTGAAAAAAC AAGCAAATCG TATTGGTAAC
    ACTATTTTAG AAAATTTAGT TCTCCATTTT ACTTGATATT TTTCATCAGA
    CAGATTCTAC GAATCTAACC AAAACTCCCC CAAAAAGATA AACCTCAAAA
    TGTACACGTA TTAGAAAATA CACGTAAAAG TGACATCACC ATGTATATAT
    GAAACTAGTG GAAGTGTATT TGTTAGGTGA GCATATAATC GTATCGAGAA

AT3G18940.1

Model type
Protein coding
Short Description
clast3-related
Computational Description
clast3-related; CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 2, eukaryotic (InterPro:IPR016562), Proteasome assembly chaperone 2 (InterPro:IPR019151); Has 249 Blast hits to 248 proteins in 114 species: Archae - 1; Bacteria - 0; Metazoa - 124; Fungi - 51; Plants - 58; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G18950.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49450.1); Has 30107 Blast hits to 16274 proteins in 601 species: Archae - 20; Bacteria - 4381; Metazoa - 11289; Fungi - 6965; Plants - 3765; Viruses - 0; Other Eukaryotes - 3687 (source: NCBI BLink).
Link
InterPro Scan - TAIR