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GT15388

CSHL Arabidopsis genetrap mutant lines

Original: GT15388

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15388

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11681611 [Map]; Strand: w
      • AT1G32380.1 - [+] show detail - phosphoribosyl pyrophosphate (PRPP) synthase 2
        Distance: -141; Region: promoter
    Flanking Genome Sequence: GT15388 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTAACA GTCGAAAAGA 
    GAAATTGTTT TCAAACACAA ATTCTAAAGA ATCTCATACT GATTCCTAAT
    GCCCACTTGT TTCTAAGCAT TTTTCATGCC ACTTTAGGAT TCCAATAACT
    AATTATGAAC ATAAATTTTC TAAAAAAAGA ATATATTTTC AGCAAAAAAA
    CTTTTTAAAA AAAAAAACCA TTTGTTTTTG GGGTTCTTTC GGCTATACAA
    ATAGATGGGG TCACATCATT AATATGGGCC ATTGCAACAA TTGAAAAGGG
    CAAATTTTGG AAAAAACAAG TCAAAAACTC AAAAGGGGAA AATGTGATTC
    TTCCCCTACA TAAAAAAGGT TACAACTTAC AAAAAACCTC TTCAAGGTAC
    TTACAAAACA TCATAAAAAT GGCCTAAAAA CTTGTTTTGA GTTTAAAGAG
    ATCCAAATTG AAAACATATG CAGCCATAAG GATTTGTTGC CTTTTGGGTG
    AAACTGAAAA GGCAAACGGG TTATAATAAT AAAAAGCCCC AATGTCATAT
    TTAACACTTT AAAGATATAA GGAGATGTGA TTAGCCTTTG C
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11681709 [Map]; Strand: w
      • AT1G32380.1 - [+] show detail - phosphoribosyl pyrophosphate (PRPP) synthase 2
        Distance: -43; Region: promoter
    Flanking Genome Sequence: GT15388 - 5-prime edge
    GTCCTACATG ACACGTAAGC TGTGAAAGCT ACGAGCAGAG ACGATTTTAG 
    CCATCAACCA AAACGACACC GTTTCTGAAC AATATTTATT TTTGTATGTT
    TTTAGTGTAA CAAAATTACA ATTGAAAATT CCAAATTTCG AGAAAGAGAG
    AAGACCCATC GCCGCACCGC TTGAGTCACT CTTCTTCCCG GAGAAGAAAG
    AAACAACAAC AAACATATTC ACCATTACCT TCTTCTTCTC CTCCTTCTAC
    TTCGTTTCTC ACTCCAAATT TGGAACCCTA AATCCTAATA TCCTTCGATT
    AGTTCTCTTC TCTATCGGAA TTCTTAACGT TGAGAGGAGT CTGATATTTG
    CCGTGACTCA AGAGATTCCA GGTGTTTCCG ACGTATATAT TTACATATGG
    CGTCGTTGGC TCTGACTTCT CCTCCCTCCG TTAAGATTCC TTCGTATCTC
    TCCTCGTCGT CTTC

AT1G32380.1

Model type
Protein coding
Short Description
phosphoribosyl pyrophosphate (PRPP) synthase 2
Curator Summary
Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.
Computational Description
phosphoribosyl pyrophosphate (PRPP) synthase 2 (PRS2); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G35390.2); Has 11410 Blast hits to 11162 proteins in 2771 species: Archae - 272; Bacteria - 6075; Metazoa - 636; Fungi - 714; Plants - 210; Viruses - 13; Other Eukaryotes - 3490 (source: NCBI BLink).
Link
InterPro Scan - TAIR